Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 471 a.a., TolC family protein from Pseudomonas fluorescens SBW25-INTG

 Score =  220 bits (560), Expect = 9e-62
 Identities = 155/474 (32%), Positives = 228/474 (48%), Gaps = 39/474 (8%)

Query: 16  MTGCAVGPDY--QRPNAVLSDRFLGQPSVEQRSGTTQASLTTWWEGFGDPVLSDFIAKAL 73
           ++ CAVGPDY  Q P A            +Q        +  WW+ F DP L+  + ++L
Sbjct: 15  LSACAVGPDYKTQTPEAA---NITAAADAKQYDHAKFEGI--WWQQFEDPTLNQLVTQSL 69

Query: 74  EQNLDLAQASARVAQARAGLGAANAALLPS-----------GNISGQAARAYQSVETPQG 122
           + N DL  A AR+  ARA    A+   +P+           G I GQ  R  ++      
Sbjct: 70  QGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDQGKGQIPGQTTRRVKT------ 123

Query: 123 QLLNSNPGFDRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRLAVAAQ 182
                          Y+L L  +WELD+FG ++R  EA  A+ QA+EA     ++ + A+
Sbjct: 124 -------------ERYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTLIAE 170

Query: 183 TADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQVQATV 242
             D Y  LRG Q R  IA   +K QQ+       L   G+     V + +  LA V+A+V
Sbjct: 171 LVDAYGQLRGAQLRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASV 230

Query: 243 PVLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEMGTPADLLRRRPDLIVA 302
           P LQ       N +  +LG  P      L     +P   +   +G P  LL+RRPD++ A
Sbjct: 231 PQLQAEQVRERNRIATLLGQRPDKLSVDLGPK-DLPAIAKALPIGDPGQLLQRRPDILSA 289

Query: 303 ERRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGLRWRLFDF 362
           ER+LAA+ ARIG A A+ +P+ SLS  LG  TA     + S  A+  +    + W  FD 
Sbjct: 290 ERKLAAATARIGVAKADLFPRVSLSGFLGF-TAGRGSQIGSSAANAWALGPSITWAAFDL 348

Query: 363 GRINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLTVGEASLSEAR 422
           G + A++  A  +   ALA+Y Q  L A E+ ENAFS    R+ +  +L     S   A 
Sbjct: 349 GSVRARLRGADAEADGALASYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAA 408

Query: 423 RSSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGGGWQ 476
             + I Y++GT   + +L+A +  L A D++AQA  +  R  VA ++ALGGGW+
Sbjct: 409 DLAAIRYREGTVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWK 462