Pairwise Alignments

Query, 831 a.a., Outer membrane usher protein FIMD from Pseudomonas fluorescens FW300-N2E2

Subject, 814 a.a., fimbrial protein from Pseudomonas fluorescens FW300-N2E3

 Score =  448 bits (1153), Expect = e-130
 Identities = 264/778 (33%), Positives = 423/778 (54%), Gaps = 24/778 (3%)

Query: 69  PGRYRVELQINRRSFGLRELDFSL-SPEGDLLPCLSSDLLQELGVRLDGLADNQALNTD- 126
           PG YRV++  N    G R++DF L S    +  CL+ D++++LG+ +  L     LN D 
Sbjct: 43  PGTYRVDVYSNEVMVGRRDIDFRLMSTSNKVQACLTLDIIRQLGIDMSKLETGGQLNPDA 102

Query: 127 ---CIDLASVIPGANIEFEGAKLWLSLSVPQIAMRRNQSGYADPERWDHGINAAFINYQV 183
              C DL S+I  A + ++  +L LS+++PQ+A++R   GY DP  WD GI+AAFINYQ+
Sbjct: 103 PGTCYDLPSLIDKATVNYDPGRLRLSITIPQVALQRGMRGYVDPALWDAGISAAFINYQL 162

Query: 184 SAQQSNHQQGGSSQSDDLYLNSGLNLGAWRLRSNQTLRRNEQNQREWSSAYTYAQRDLPG 243
           S  + N     +S S+ L L +G+NLGAWRLR+             ++S  +Y + D+  
Sbjct: 163 SGNR-NDTDYSTSISNSLGLRNGINLGAWRLRNESNFSSRTGESNSFTSNRSYVEHDVTA 221

Query: 244 LQANLTLGETFTRGDVFRSLPIKGAIIASDPDMLPDALQGYAPVIRGVAQTRAKLEVLQN 303
           L+   + G+ F+   ++ S+  +G  ++SD  M  D+ +GYAPV+RGVAQT A +E+ Q+
Sbjct: 222 LKGQFSAGDIFSDSQLYDSVRYRGVKLSSDEGMRADSERGYAPVVRGVAQTNATVEIRQD 281

Query: 304 GYPIYSTYVSPGAYEIDDLTTVGGSGELEIVLTEADGQVHRYTQPYATLSNLLREDLWRY 363
            Y IY+T V PG +EI+D+   G +G+L++ + EADG+     Q +++L  ++R+   +Y
Sbjct: 282 NYIIYTTSVPPGPFEINDIYPSGSNGDLQVTVIEADGRRRETRQAFSSLPIMVRKGQIKY 341

Query: 364 SATVGHYNAISEG-DHPLLWQGTLAWGLGWSTTLYGGAMGSDFYRAVTLGASRDLGALGA 422
           SA+ G YN+ SEG   P L+ GTLA+G+  + T   G   SD + A++LG  R+    GA
Sbjct: 342 SASAGKYNSNSEGLASPKLFSGTLAYGISSNLTGIVGMQSSDNFSAMSLGMGRNT-TFGA 400

Query: 423 LALDLSHSDTQA-SQDVQGKSYSVKYGKSFQSGTQLRF--AGYRYSTEGYRDFDEAVRDR 479
            + DL+HS +Q      +G S  + Y K+F +GT   F  A YRYSTEGYR   E + D+
Sbjct: 401 FSFDLTHSSSQVRDSSSKGNSLRMLYAKTF-TGTDTNFTLAAYRYSTEGYRTLSEHIEDQ 459

Query: 480 EHDVRFFGSRRSRLEAAINQKIGKH---SSVNLTFSHQDYWQTNNTQRQFQFNFNTQHKG 536
            +  +  G+ ++R +  INQ +G++    SV L  + Q YW +  +Q      ++   + 
Sbjct: 460 SYTDQRRGNSKTRTDLTINQSLGRNQQLGSVYLNATDQRYWGSGGSQ-SLSAGYSNSWRD 518

Query: 537 VTYNVYALQSLRDNDKRNMSEQRQMGLSVSLPLDFMPSSTATFDVQNNAGRHSQRASLSG 596
           +TYN+    +    ++ + +   Q+ LS+S PL   P +   F + ++  +      L  
Sbjct: 519 LTYNLGVTHTKDVGNRGSANNDTQVNLSLSFPLGSTPRAPRAF-ISSSTQKSGNSTQLGV 577

Query: 597 N---SLENRLNYRTSISHDSQQRQSAELALGYQGATGSVGAGITQSSHYRTTSLNASGAL 653
           N   S ++   Y     + S    +   ++  + A      G +Q   Y + +LN +G++
Sbjct: 578 NGYVSEDSDTYYSLQAGNSSNGGNTGSASISTRSAFVDANVGYSQGRGYNSQNLNLAGSI 637

Query: 654 LLHADGIEAGPYLGETLALVEVPDIP-GVGVKNATGVKTNAQGFALVPYLRPYRMNQVSL 712
           + HA GI  G  LGET AL EVP +P GV + + +G KT + G+A++P  +PYR+N +SL
Sbjct: 638 VAHAGGINLGQTLGETFALAEVPGVPGGVKINSFSGTKTGSNGYAVIPNTQPYRVNWISL 697

Query: 713 QTDDLGPEIEIDNGTAQVVPRRGAVVKTTFTARTINRLLISGQTANGQALPFGAQVSDAQ 772
            T DLG ++EI+N T QVVPRRGA V   + + T  R+      +  + LPFGA + DA 
Sbjct: 698 DTRDLGADVEIENATQQVVPRRGAAVLVRYLSETGRRVQFELFDSAHRRLPFGAALEDAS 757

Query: 773 GTVLGTVGQAGQVLLSVGPEPQQLNVRWAPGDAPQCRLDVNPQTMEQVQGYRIQALTC 830
           G  +      G+ L  V      L ++WA     QC+   +    ++   Y    L C
Sbjct: 758 GKQIAIADPNGKALALVQDPRALLTIKWAD---RQCQATYSLPERDKALNYERVPLVC 812