Pairwise Alignments

Query, 621 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Pseudomonas fluorescens FW300-N2E2

Subject, 591 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  304 bits (778), Expect = 8e-87
 Identities = 202/598 (33%), Positives = 313/598 (52%), Gaps = 37/598 (6%)

Query: 34  DSWRRSLEQHHLDPGSLQGPRILSQDVLKQCRERSELFLNIASEEVARLHGRVR-DADYC 92
           DSW RS +   L    L     L+ + L +    ++  +N+  +    L  ++   +   
Sbjct: 13  DSWSRS-QGAGLSEAKLPQELRLNAEALAERHHANKQLINLTKQHALPLFNQMMAHSQSR 71

Query: 93  VLLTDAQGQTIDYRVETTIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTAKAPVTVHKRD 152
           ++L+D  G  + +   +   +      L +G  W E  +GT  +   LTA+  V V    
Sbjct: 72  LILSDRDGYVLCHWGVSRYSDKLANVALDVGVNWREEHKGTNAIGTALTARQTVAVIGEQ 131

Query: 153 HFRAAFIGLTCSAAPVFDPQGELLGVLDVSAVRSPDDRRSQHLIRQMVVQSAREIEQAFF 212
           HF      ++C+A+P+F P+GELLG +D+++ +    +++  LI  +V Q    IE A  
Sbjct: 132 HFIRHHRFMSCTASPIFSPEGELLGAIDITSEQQRHTQQTLVLIASLVQQ----IETALL 187

Query: 213 MSSAQGYWVLRAHRNAGYVDSQPDFLFAWDDDGCLQALNPAARQYLLQHY--GQLPQHIG 270
                 ++ +        + S    +   + DG L   N  A++ L +      + +H+G
Sbjct: 188 CHLPGSHYRIDLAEQPSLITSGWQGIVVANVDGKLLGCNAMAKRLLHRPRIGDDIDRHLG 247

Query: 271 QVFDQQLLHRARDESLCSLDHAMHGRL-----SAPRQRASSRSRVAVTPLEIDPRLADSL 325
             ++         E +C  D  +H +      + P Q  S +  V       DP+L  + 
Sbjct: 248 ASWNS-------GEQVCQ-DQRLHLKTQQLVETRPSQLVSQQIGVRFR----DPKLERAW 295

Query: 326 RLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQRRDRPFVALNCAAIPESLIESELFG 385
           + A +V  RN+P+LI GETG GKE F ++LH  S R  RP VA+NCAA+P  L+ESELFG
Sbjct: 296 QQANKVVGRNIPLLICGETGVGKEQFVKKLHGQSTRAQRPLVAVNCAALPAELVESELFG 355

Query: 386 YVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMPLALQTRLLRVLAEGEVAPLGASRRK 445
           Y AGAFTGAS +G +G ++QADGG LFLDEIG+MPLA Q+RLLRVL E EV P+G +R  
Sbjct: 356 YQAGAFTGASRQGFEGKIRQADGGFLFLDEIGEMPLATQSRLLRVLQEREVVPVGGNRSY 415

Query: 446 AVDIQVICATHRDLETLVAAGEFREDLYFRLGGARFQLPPLRERSDRLALINRILAEESA 505
            VDIQV+ ATH DL  LV+ G FREDLY+RL G +  LPPLR+R+D   +I+++      
Sbjct: 416 KVDIQVVAATHADLRQLVSEGAFREDLYYRLNGLQVSLPPLRQRADIERIIHKL---HRR 472

Query: 506 LCGATVQLSGAALECLLGYHWPGNVRQLRHVLRYACAVCEAS-VVQLSHLPESMH-HTDA 563
              A  QL    L  LL + WPGN+R+L ++++ AC + +    +   HLP+++      
Sbjct: 473 YRQAPQQLCPQLLRRLLAHDWPGNLRELDNLMQVACLMADGDPELNWQHLPDTLQAQLQG 532

Query: 564 ADHGPEPSASPERQA-------LLDALVRHRWKPTAAARALGISRATLYRRVNLHGIE 614
            +   E  A+ E +        ++ +  R     +  A+ LGISR TLYR++   G++
Sbjct: 533 PEQAGEQMAACESELSLMVNANIVSSFHRFEGNVSRCAKHLGISRNTLYRKLKALGLK 590