Pairwise Alignments

Query, 1213 a.a., Exonuclease SbcC from Pseudomonas fluorescens FW300-N2E2

Subject, 1044 a.a., exonuclease subunit SbcC from Klebsiella michiganensis M5al

 Score =  400 bits (1027), Expect = e-115
 Identities = 394/1230 (32%), Positives = 559/1230 (45%), Gaps = 211/1230 (17%)

Query: 1    MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60
            MKIL++RLKNL SL G ++IDF+AEP AS GLFAITGPTGAGK+TLLDA+CLAL+   PR
Sbjct: 1    MKILSLRLKNLNSLKGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60

Query: 61   LNNTGRDAKVPDVDGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA 120
            L++  +                  L+ R T +  AEV+F  + G  YRA W  NRAR + 
Sbjct: 61   LSSVSQSQN--------------DLMTRDTAECLAEVEFE-VKGIAYRAFWSQNRARNQP 105

Query: 121  GGKLQASRQSLRDLDNDQLLASQKGEYKTQLETAL-GLNFEQFTRAVLLAQSEFSAFLKA 179
             G LQ  R  L   ++ ++LA  K + K +L  +L GL++ +FTR++LL+Q +F+AFL A
Sbjct: 106  DGNLQVPRVELARCEDGKILAD-KVKDKLELTASLTGLDYGRFTRSMLLSQGQFAAFLNA 164

Query: 180  DDNERSELLEKLTDTALYTRLGRRAFDKAKHAKETHKQLQDQATGVTPLAPEARAELDQR 239
               ER+ELLE+LT T +Y ++  + F+K       HKQ              AR EL++ 
Sbjct: 165  KPKERAELLEELTGTEIYGQISAQVFEK-------HKQ--------------ARVELEK- 202

Query: 240  FTEAQLQLKAQQAQLKQLEQQHTWLRDLGLLQDEHASAAEQLQQAQADWNALADERLKLV 299
                 +Q +A    L   EQQ        L Q   A  +E+ QQ                
Sbjct: 203  -----IQAQASGVLLLSEEQQQA------LQQSLQALTSEEKQQVSEQ------------ 239

Query: 300  RLEQLAPQRHQFIRQTELNRQLEPLTAQIQQLTQQQIDLHAQQA--ELEKALDDAQQALA 357
                    R Q  RQ ++ R  E LTA+         DL AQ A  E + AL+ AQ  L 
Sbjct: 240  -------TRLQNARQWQIRR--EELTAE---------DLRAQTALREAQSALEQAQPQL- 280

Query: 358  SARQQSIDSAPLLRQAFGEQSTLARLAQDANLSAERQEQAQQACTEGQRTIDTLLEQQRQ 417
            SA   +  +  L  Q   +Q   A LAQ    +  ++E+      +  R    +    RQ
Sbjct: 281  SALLNAQPAERLRPQWTRQQEQTAALAQ----TRRQREEVNTRLHDRLRLRAGIRLAARQ 336

Query: 418  VAERLQRIADALEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEQSATRAA 477
              E+L      L            W    DR Q   L GN L   +A      Q   R  
Sbjct: 337  QYEQLHSRQQTLS----------VWLKEHDRFQ---LWGNALAGWRAAF----QQQARDT 379

Query: 478  EELATRRQDLEVLYKEAGAEPQAV----AEQIQLLGTLLQDNRKQLRAFEDLTRLWASQQ 533
            ++ +  +  L   ++  G  P A     AEQ+   G       + LR  + L  L    Q
Sbjct: 380  QQQSAVQLRLAETHRRLGELPPAGLTLDAEQVSA-GLAQHAAARALR--QQLAALHGQLQ 436

Query: 534  ELDKRGAELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVE 593
             L +R  +L+   Q + QE++RL     + +       Q  +  + L E +  AR   +E
Sbjct: 437  PLAQRLLQLDAAGQASKQEQERLEATLAQRRQAYKEKHQQFSDVKALCEME--ARIAGLE 494

Query: 594  QLRAQLQDEQPCPVCGSVEHP-YHQPEALLE--NLGRFDETEEANARKAVDLLNEKVIDL 650
              RA+LQ   PCP+CGS +HP   + +AL+   N  R D  E     + V  L E     
Sbjct: 495  TERARLQPGSPCPLCGSAQHPAVAEYQALVPGVNQARRDALE-----REVKQLAEAGALA 549

Query: 651  RTQYSGVIAQLKELKQQQEQLASQQQSLAPSLEAHPLSAQLLAQDSNKRDTWLAQQNSQL 710
            R +   +I Q ++   ++  L  Q+Q+L    +       +     +    WL  Q    
Sbjct: 550  RGELDALIKQQQKEAAEKASLLQQEQALTSRWQETIAGLNIDLTPKDDIPGWLNAQQ--- 606

Query: 711  HQHISQDEQRQTALLTLQQDAARLAQQLRDAETASQQAAQQLSNQQQELARDRQRLDDEL 770
                 + EQR      L Q   RLA Q                 QQQE  +  Q+L  E 
Sbjct: 607  -----EHEQR------LYQHQQRLAWQA----------------QQQECQQQLQQLQREQ 639

Query: 771  SHFSALLPADTLQALRTEPAATFMQLDQQIAQRLEQLEQQRDELSEQLQRQQTLEKEQDR 830
               SA L A+        PA    Q    +AQR E+    + + +E+L  Q+        
Sbjct: 640  EQRSAALAAELSAFALDLPAVG--QAAGWLAQREEETRGWQAKQNERLALQE-------- 689

Query: 831  QQTRLQQLEAVRLQFSALSEQQQACQQQLTQLLGEHTSAEQWQQQLDQRL---EQTRDAE 887
               ++QQL  +     AL E         T L  E    + W+Q  D  L    Q +   
Sbjct: 690  ---QIQQLAPL---LEALPE---------TDLAAEPAPLDGWRQVHDDCLALQSQWQTLG 734

Query: 888  ATANQQLQQLRNDLVQLAAELKARQEQARSLDLERQALAAGIAQWRTSHPELDDAALEAL 947
               +QQ  QL+    Q +A L A      S   +RQA  A +    T             
Sbjct: 735  QQESQQQAQLKESEAQFSAALAA------SPFADRQAFLAALLDEETR------------ 776

Query: 948  LGLDDQHVSQLRQRLLNSEKAIEQARVLLTEREQRLQNHQAQHNGNL----LPEQLAEAL 1003
                 Q + +L+Q L   E A++Q + L     + L NH  Q   +      PE+L + L
Sbjct: 777  -----QRLERLKQTL---ENALQQNQALALRAREALVNHSQQPPADADIGQPPEELQDKL 828

Query: 1004 TELQGQFAASEQRCAELRAEQAEDQRRQNANQALAQQIEQAYIEYQRWARLDALIGSATG 1063
             +L      +  R  E+R +  ++   Q   Q L  Q+E+A  E + W  L++LIGS  G
Sbjct: 829  QQLTSLLRENSARQGEIRQQLKQNAENQQRQQLLRLQMERAAQEVEDWGWLNSLIGSREG 888

Query: 1064 DRFRKLAQAYNLDLLVHHANAQLRQLVRRYRLKRGGS-MLGLLVMDTEMGDELRSVHSLS 1122
            D+FRK AQ   LD LV  AN QL +L  RY L+R  S  L L V+DT   D +R   +LS
Sbjct: 889  DKFRKFAQGLTLDNLVWLANHQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLS 948

Query: 1123 GGETFLVSLALALGLASMASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVA 1182
            GGE+FLVSLALAL L+ + S   +I+SLF+DEGFG+LD E+L  A+DALD L A G+ + 
Sbjct: 949  GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIG 1008

Query: 1183 VISHVQEMHERIPVQIQVRR-QGNGLSTVE 1211
            VISHV+ M ERIPVQI+V++  G G S ++
Sbjct: 1009 VISHVEAMKERIPVQIKVKKINGLGYSRLD 1038