Pairwise Alignments

Query, 397 a.a., 2-methylaconitate isomerase from Pseudomonas fluorescens FW300-N2E2

Subject, 389 a.a., putative AcnD-accessory protein PrpF (RefSeq) from Shewanella loihica PV-4

 Score =  577 bits (1487), Expect = e-169
 Identities = 294/387 (75%), Positives = 327/387 (84%), Gaps = 4/387 (1%)

Query: 6   QIRIPATYMRGGTSKGVFFSLQDLPEAARVPGTARDALLLRVIGSPDPYEKQIDGMGGAT 65
           Q++IPATYMRGGTSKGVFF+L+DLP  A+ PG ARDALLLRVIGSPDPY KQ DGMGGAT
Sbjct: 3   QMKIPATYMRGGTSKGVFFALKDLPLNAQQPGPARDALLLRVIGSPDPYGKQTDGMGGAT 62

Query: 66  SSTSKTVILSKSTRADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISSGLVDAGR 125
           SSTSKTVIL KS R DHDVDYLFGQV+IDKPFVDWSGNCGNL+AAVG+FAI+ GLVD+ +
Sbjct: 63  SSTSKTVILDKSQRDDHDVDYLFGQVAIDKPFVDWSGNCGNLTAAVGAFAITQGLVDSAK 122

Query: 126 IPQNGVAVVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQLEFMDPAAEE 185
           IP NG+AVV+IWQANI KTIIAHVP+ DG VQE GDFELDGVTFPAAEV +EF+DPA   
Sbjct: 123 IPDNGIAVVKIWQANINKTIIAHVPMVDGEVQELGDFELDGVTFPAAEVLVEFVDPA--- 179

Query: 186 EGGGGSMFPTGNLVDDLEVPGVGTFKATLINAGIPTIFINARDVGYIGTELQGAINGDPK 245
             G G MFPTGNLVD LEVPG   F AT INAGIPTIF+ A  +GY GTELQ AINGD  
Sbjct: 180 -DGEGDMFPTGNLVDKLEVPGEPVFDATFINAGIPTIFLKAEQLGYEGTELQEAINGDAA 238

Query: 246 ALAMFETIRAHGALRMGLIKHLDEAAQRQHTPKVAFVAPPADYVSSSGKAVAAGDVDLLV 305
           AL  FETIRAHGAL+MGLI+ LDEAA RQHTPK+AFVAP   Y SSSGK +AA ++DL V
Sbjct: 239 ALERFETIRAHGALQMGLIQSLDEAAGRQHTPKIAFVAPAKAYTSSSGKQIAAEEIDLHV 298

Query: 306 RALSMGKLHHAMMGTAAVAIGTAAAISGTVVNLAAGGVERNAVRFGHPSGTLRVGAEASQ 365
           RALSMGKLHHAMMGTAAVAIGTAA+I GT+VN AAGG  R +VRFGHPSGTL+VGA+AS+
Sbjct: 299 RALSMGKLHHAMMGTAAVAIGTAASIPGTLVNQAAGGQARESVRFGHPSGTLKVGAKASE 358

Query: 366 VNGEWTVKKAIMSRSARVLMEGFVRVP 392
             G W V+K  MSRSARVLM+G+V VP
Sbjct: 359 QEGRWQVEKVSMSRSARVLMQGWVCVP 385