Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (413), Expect = 4e-45
 Identities = 102/302 (33%), Positives = 157/302 (51%), Gaps = 15/302 (4%)

Query: 1   METFNSIECFVRSAEVGSFAEAARRLSVTPAAVGKSVAKLEARMGVRLFQRSTRSLRLTE 60
           ME F+++  FV   E GSF+ A ++L ++ +A+ K + +LE  +G++L QR+TRSL LT+
Sbjct: 1   MEHFSALPIFVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTD 60

Query: 61  AGQLFLREVGSSFNTIQNAVANLASAGGQPAGTLKVSMGTAFGRLYVVPLLGEFLRRYPA 120
           AG  +   +  +    Q  +  ++     P G L++S+   FGRLY+ PL+ EFL+RYP 
Sbjct: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPKGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120

Query: 121 INPDWHFDNRQVDLIGQGFDAAIGGGFELP-QGVVARKLTVAHRVLVASTDYLQTHAAVT 179
           I      D++  DLI  GFD AI  G ELP   ++ARK+     V+ AS  YL  H +  
Sbjct: 121 IQLQMQMDDKTTDLIAGGFDLAIRIG-ELPDSSLIARKIAPCLSVICASPAYLAQHGSPM 179

Query: 180 EPEDLSQHQGILIRSPQTGRVRSWQLTSRNREHSPLTL-----KTRMTMSDSEADCAAAT 234
            P  L+QH  +     Q G   S+        HSP  +     K    +++S+A   A  
Sbjct: 180 TPSGLTQHNCLFYSYFQDGVEWSF--------HSPYGVQRVQPKGNYQVNNSDAIHQACL 231

Query: 235 QGLGIGLVSMPIAVPFLESGALQRVLPDWYADDGNISIYYAEHKLLPGKTRAFVDFIIEQ 294
            GLGI  +   I    L++G LQ +L D+   +  I   Y + K LP K    + F++E+
Sbjct: 232 DGLGIANLPRFIVESDLQAGRLQTILTDFPLPEHGIYAVYPQRKYLPTKVTVLIGFLMEK 291

Query: 295 FA 296
            A
Sbjct: 292 LA 293