Pairwise Alignments

Query, 276 a.a., FIG00953934: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  278 bits (710), Expect = 1e-79
 Identities = 137/270 (50%), Positives = 182/270 (67%), Gaps = 4/270 (1%)

Query: 7   GAISKMSARLD-GPTVQYAFRLGDVEVPVNPLIGSTVRLEYLGAIHCTHCGRRTKTSFSQ 65
           G + K+ A LD    VQY   +G+  +P+NPLIG  + L + G I C +CG++TK S+SQ
Sbjct: 3   GTLKKLRAHLDEAQQVQYQLVVGEELLPLNPLIGQPLTLTHTGNIFCCNCGKKTKKSYSQ 62

Query: 66  GYCYPCMTKLAQCDLCIMSPERCHYEAGTCRDPAWGERFCMTDHVVYLANSSGVKVGITR 125
           G+C+ CM KLA CD+CIM PE CH++ GTCR+P W +  C   H VYL+N+SG+KVGITR
Sbjct: 63  GHCFVCMQKLASCDMCIMKPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITR 122

Query: 126 ATQLPTRWLDQGASQALPILRVATRQQSGFVEDLFRSQVADKTNWRALLKGDAVAVDLPA 185
            TQLP+RW+DQGA+Q LPI +VATRQ SG VE      + DKT+W+A+LKG A  +DL A
Sbjct: 123 HTQLPSRWIDQGATQGLPIFKVATRQISGLVEVELAKLINDKTHWQAMLKGHADDIDLQA 182

Query: 186 IRDALFESCAQGLQGLQERFGLQAIQTIADVEPIE-IRYPVEQYPAKIVSFNLDKNPIAE 244
               L       L  +  + G  +I+ +   E I+ I YP+E +P KI S N DK  +  
Sbjct: 183 KAAELIPHIEAKLHEIGMQKGNYSIERLQ--ENIQTIHYPIEVFPKKITSHNFDKEAVVS 240

Query: 245 GTLLGIKGQYLIFDTGVINIRKYTAYQLAV 274
           G L GIKGQYL+FDTGVINIRK+TAY+++V
Sbjct: 241 GILQGIKGQYLLFDTGVINIRKFTAYEVSV 270