Pairwise Alignments

Query, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 339 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  214 bits (546), Expect = 2e-60
 Identities = 115/310 (37%), Positives = 179/310 (57%)

Query: 12  RKPLDLRRFLDDWVMLLAAIGIFVLCTLMIDNFLSPLNMRGLGLAISTTGIAACTMLYCL 71
           + P D  ++ D   +L+  + + +L +    NF    N+  +  +IS   I A  M + +
Sbjct: 13  KAPFDFAKWWDRVGILIVLLVLLILMSTFAPNFNRVDNLLNIARSISVNAILAAGMTFVI 72

Query: 72  ASGHFDLSVGSVIACAGVVAAVVMRDTNSVFLGISAALVMGLIVGLINGIVIAKLRVNAL 131
            +   DLSVGS++A +GVV+ V         L I A + +G + GL+NG++ A L +   
Sbjct: 73  LTSGIDLSVGSIVAVSGVVSVVAAMAGIPAPLAILAGVGVGALCGLLNGVLTAYLALAPF 132

Query: 132 ITTLATMQIVRGLAYIFANGKAVGVSQESFFVFGNGQMFGVPVPILITIVCFLFFGWLLN 191
           I TL TM  +RG+AY    G+ +  S  SF   GNG + G+P+P++I +V +L   ++L 
Sbjct: 133 IVTLGTMTFLRGMAYTITEGQPIVSSSLSFRELGNGYLIGIPIPVIIMLVVYLLAWFILE 192

Query: 192 YTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILASRMTSGQPMIGQ 251
            T +GR+  A+GGN +AA LAGV V R    ++ + GV   LAG+I A+R+ S QP  G 
Sbjct: 193 RTRFGRHIYAVGGNAQAARLAGVRVKRVLAAVYMIAGVCAGLAGIIFAARVISAQPTAGT 252

Query: 252 GFELTVISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILL 311
           G+EL  I+A VLGG SL+GG G I   + G +IL ++   + L ++  F Q +I+G +++
Sbjct: 253 GYELDAIAAVVLGGTSLAGGRGRIIGTLIGSIILGVLSTGLILLSVPFFTQLLIKGIVII 312

Query: 312 LAVVIDRLKQ 321
           LAV ID LKQ
Sbjct: 313 LAVAIDGLKQ 322