Pairwise Alignments

Query, 321 a.a., Type II/IV secretion system protein TadC, associated with Flp pilus assembly from Pseudomonas fluorescens FW300-N2E2

Subject, 287 a.a., type II secretion system protein (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (249), Expect = 4e-26
 Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 5/209 (2%)

Query: 101 AGYRSASAVQMYWAVRLMLPLLLVGIALLLLPMVKVSVAIGLLAVTLIAGIGWLLPAIYV 160
           +G       + Y+A+R++  L  +G+ L+   M+   V   LL   L A  G+ LP + +
Sbjct: 75  SGLSYIMTAEQYFAIRILSTLFSLGLTLICSAMLDAYVPQYLL---LAAVFGYFLPVMTL 131

Query: 161 GKRKQARQGRLRAAFPDALDLMVVCVESGLALPTTIERVAEEMSVSQVELAEELALVNAQ 220
              ++ RQG +  + P  LD + + +E+GL +   + +  E      + +  E   V   
Sbjct: 132 NDLRKKRQGLIVKSLPVYLDYLTMSIEAGLNMTGALSQAVERGPAGPLRI--EFEKVIRD 189

Query: 221 IRAGITSTEALKQLAVRTGLEDIQGLVSLLAQSIRFGTSVADTLRIYADEFRDRRTQAAE 280
           +RAG++  +A + +A R  + ++  LVS LAQ+ R G S+  TLRI +D+ R  R Q AE
Sbjct: 190 MRAGMSRAQAFRNMADRVQVTEVNSLVSALAQAERTGASLGQTLRIQSDQRRIERFQRAE 249

Query: 281 EMGAKIGTKLIFPLIFCLWPSFFLVAIGP 309
           +   +   KL+FPLI  ++P  F++   P
Sbjct: 250 KKALEAPVKLVFPLIVFIFPVTFMILAFP 278