Pairwise Alignments

Query, 321 a.a., Type II/IV secretion system protein TadC, associated with Flp pilus assembly from Pseudomonas fluorescens FW300-N2E2

Subject, 284 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  183 bits (464), Expect = 5e-51
 Identities = 102/266 (38%), Positives = 158/266 (59%), Gaps = 6/266 (2%)

Query: 60  AGSTTGQEAPGNLQLLLERIGQRFASTDQAHTSATQTLLTHAGYRSASAVQMYWAVRLML 119
           + +T   +    +  + ER+GQR  +      +     L  AGYR+ +A +++W V+  L
Sbjct: 19  SATTLSDDMRRGINAMAERLGQRVINEGDTELTEAGMALARAGYRNRTAPRVFWGVKAGL 78

Query: 120 PL--LLVGIALLLLPMVKVSVAIGLLAVTLI--AGIGWLLPAIYVGKRKQARQGRLRAAF 175
            +  LL+G+ + LL  +   V  G++A+  I  A  G  LP I++  R + R+  +  A 
Sbjct: 79  TVAGLLMGLTVRLL--LGDDVPAGMVALLFIGPAVTGLYLPNIWLSSRIKERRQEIINAL 136

Query: 176 PDALDLMVVCVESGLALPTTIERVAEEMSVSQVELAEELALVNAQIRAGITSTEALKQLA 235
           PDALDL+VVCVE+G+ L   + RVA+E+  +   LAEEL L   ++RAG +  + LK LA
Sbjct: 137 PDALDLLVVCVEAGMGLDQALARVAKELQSTSPVLAEELQLSILELRAGKSRADTLKNLA 196

Query: 236 VRTGLEDIQGLVSLLAQSIRFGTSVADTLRIYADEFRDRRTQAAEEMGAKIGTKLIFPLI 295
            R  +ED+  LV+L+ Q+  FGTS+A TLR+Y+D  R  R Q AEE+ AK+  KL+FPL+
Sbjct: 197 ARVAIEDVNSLVTLIIQADAFGTSIASTLRVYSDTMRTTRFQRAEEIAAKMPVKLLFPLV 256

Query: 296 FCLWPSFFLVAIGPAMIGVFRAFGNM 321
           FC+ P+ F+  +GPA I + + F  M
Sbjct: 257 FCILPALFVTIMGPAFIKLMQVFAQM 282