Pairwise Alignments

Query, 249 a.a., Flp pilus assembly protein RcpC/CpaB from Pseudomonas fluorescens FW300-N2E2

Subject, 298 a.a., SAF domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 18  LRSVVVATVEIPFGQMVEAQQVTTVRMPMDTIPDDAFDSSEQAVGKIATFDILRGDIVRG 77
           +  V+VAT  +  G ++    ++  ++  DT+P DA   S    G++A   +L+      
Sbjct: 49  MADVIVATQPLKKGDIISQANMSVRQIRADTLPLDAIHPSR--FGEVAGQMLLQPMAPGR 106

Query: 78  ARLSEHLGGSTLAS---LIAPDKRAISVRVDDVVGVGGFLLPGNRVDVLAT-KTTSAGSN 133
             +  +L G  +A    ++   +RA+++ +D++    G L+P + +D+L + K       
Sbjct: 107 PLIETYLPGMRVAQFSDILKEGQRAVTIDIDEINSSAGMLVPSDHIDLLLSFKEEGRNGE 166

Query: 134 SATSRTLLENLRVLAV--------DQTAGTDKTQPVVVRAVTLEMSATEAELLVTAQTEG 185
               + LLE++ VLA          +   T    P     VTL +S  +A  +  A+ +G
Sbjct: 167 RKRLQLLLEDVTVLATGRRSIDVNPELVDTLYDNPNAYNTVTLALSVNDAARVSLAKQKG 226

Query: 186 KLQLALRN 193
                LRN
Sbjct: 227 DFVTLLRN 234