Pairwise Alignments

Query, 224 a.a., 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) from Pseudomonas fluorescens FW300-N2E2

Subject, 381 a.a., riboflavin biosynthesis protein RibD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 19/194 (9%)

Query: 3   VTVFSQISIDGKLTLGNEASSKPLFQHFDDEDMRFIHKFRGEVDAIMVGRNTIITDDPQL 62
           VTV    S+DGK  L N  S          E  R + + R    A++ G  T++ DDP L
Sbjct: 153 VTVKLAASLDGKTALSNGVSKWIT----GPEARRDVQRLRLRSCALITGIETVLADDPSL 208

Query: 63  TNRY-ESGR-----------NPVRIIPTTSLNFPASAKIFSSPEHTIIATTEEARDHKMV 110
             RY E G             P+R++  +    P +A +F+     ++ +T       MV
Sbjct: 209 NVRYSELGSLRAQLSESQVLQPLRVVLDSRARMPITAALFAIESPILLVSTVSYSSDFMV 268

Query: 111 EHIRAHGKEV-LFAGTARVDFKQLFPMLEARGINHIMVEGGGHLNWQVFNLDLVDEIMLM 169
           + + AH   + L A   R+    L   L  +  N +++E G  L        L DE++L 
Sbjct: 269 Q-LPAHVTCLQLPAIEGRISLSALLSYL-GKSCNQVLIEAGATLAGAFIGSGLADELVLY 326

Query: 170 QLPIIIGGSDTTTL 183
           Q   I+GG     L
Sbjct: 327 QAMKILGGQGRNLL 340