Pairwise Alignments

Query, 466 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  301 bits (770), Expect = 5e-86
 Identities = 177/478 (37%), Positives = 265/478 (55%), Gaps = 51/478 (10%)

Query: 13  LAGCQSTSQLPQT----DAAHTPNIAARAKQK---------PVWLTEKP-------SPQV 52
           L GCQS   +  T     A + P  +A  K+K         P   TE         +PQ 
Sbjct: 13  LVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETESVEEERVALTPQE 72

Query: 53  PQDVWERMRQGFQLQETAGV--NPRIEQQRLWFASNPSFMENAGERGSLYIHYIVERLEE 110
             DVW+R+   F+L    G+  +P ++ QR WF  NP  ++    R   +++ I E++E+
Sbjct: 73  QDDVWQRIAMQFKL----GIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITEKVEQ 128

Query: 111 RNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTT 170
           R +PLEL LLP++ES+++P AYS  +A GLWQFI STG+ + L+Q  +YDGRRD+ A+T 
Sbjct: 129 RGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAAATD 188

Query: 171 AALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPSETQAYV 230
           AALDYLT L+  F+GDW  A+AAYN+GEG V+RAI+ N+K G P D+++L LP ET  YV
Sbjct: 189 AALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETSGYV 248

Query: 231 PKLLALSQVVLSPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPA 290
           PKL+AL+ V+ + + YG+++  I N P    V+  +++DL+  A  A +   EL   NPA
Sbjct: 249 PKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSFNPA 308

Query: 291 FKQ-RTTIDGPQHLLVPTSKAQLLTASLSTMRPEELISQRALKPVFESADDSEVEGARRT 349
           + Q  T  +GP  LL+P  K +    ++   R       + +K V               
Sbjct: 309 YNQWATAPNGPHQLLIPVEKVERFNLAMEENR------GKGIKVV--------------R 348

Query: 350 YRVKRGDNLAQIAKANNVQTKDLQRWNKLSGNKLKVGQTL-VMQDAKASKARGKRISTVV 408
           Y+VK GD L+ IA   N   K ++  N+++ N+++VG  L V    K  KA    +S  +
Sbjct: 349 YKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRL 408

Query: 409 AANSKDQKKQTQ--YKVKQGDSLYVVAKRFNVEMQHLKRWNPRMGK-ALKPGQMLTVY 463
           A      + Q Q  + V  G+SL+ +AK++NV  Q L +WN    K AL+ GQ L ++
Sbjct: 409 AKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIW 466



 Score = 38.5 bits (88), Expect = 6e-07
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 349 TYRVKRGDNLAQIAKANNVQTKDLQRWNKLSGNK-LKVGQTL 389
           TY+V+ GD L+ IA    V+T D+ +WN L+  + LK GQ L
Sbjct: 480 TYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQL 521