Pairwise Alignments

Query, 466 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 511 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score =  291 bits (745), Expect = 3e-83
 Identities = 170/467 (36%), Positives = 254/467 (54%), Gaps = 51/467 (10%)

Query: 13  LAGCQSTSQLPQTDAAHT-------PNIAARAKQKPVWLTEKPSPQVPQDVWERMRQGFQ 65
           L GCQ+ +Q      A T       P + A  + +P+ +T         DVW+R+R G  
Sbjct: 15  LTGCQTFTQPEPAAPAITTAPVVVEPQVIAPVEPEPIQIT---------DVWQRIRLGLT 65

Query: 66  LQETAGVNPRIEQQRLWFASNPSFMENAGERGSLYIHYIVERLEERNMPLELALLPVIES 125
           L         + Q R W+  +P  +    ER   +++ IVE +E+RN+P+ELALLP++ES
Sbjct: 66  LPVPD--QKLVNQYRNWYLKHPQHLARVSERAEPFMYLIVEEIEKRNLPIELALLPIVES 123

Query: 126 AYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAALDYLTRLHDMFNG 185
           A++P AYS   A GLWQF     ++F L    +YDGRRD+ A+T AALD +  L+   + 
Sbjct: 124 AFDPFAYSHGAASGLWQFTAPMAKHFGLEMNWWYDGRRDVPAATVAALDMMEYLYQKTHN 183

Query: 186 DWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPSETQAYVPKLLALSQVVLSPDA 245
           +WL A+AAYN GEG V  A++RNE  GL TD+W L LP ET+ YVP+LLAL+ V+ + D 
Sbjct: 184 NWLYAIAAYNTGEGRVLNAVKRNEAKGLATDFWALDLPRETERYVPQLLALADVIANADD 243

Query: 246 YGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQ-RTTIDGPQHLL 304
           YG++L PI NEP  +VVE+  ++DL+  A +A +  +EL  LNP F Q  T  +GP  L+
Sbjct: 244 YGISLYPIPNEPQLKVVEVGSQIDLALAADMAGMKLNELHSLNPGFNQWATAPEGPHRLV 303

Query: 305 VPTSKAQLLTASLSTMRPEELISQRALKPVFESADDSEVEGARRTYRVKRGDNLAQIAKA 364
           VP   A+L    L                   +A D +     + Y++K GD+L  IAK 
Sbjct: 304 VPLDHAELFETKL-------------------AASDQDQRLKWQRYKIKSGDSLGLIAKR 344

Query: 365 NNVQTKDLQRWNKLSGNKLKVGQTLVMQDAKASKARGKRISTVVAANSKDQKKQT----- 419
            N     L+  N +  N++  G+ L++  +    A+      +++A  + QK+Q+     
Sbjct: 345 FNTTPSALRAVNDIKNNRIIAGKHLLIPVSSKDPAK-----YLLSAEQRLQKRQSGGSGY 399

Query: 420 --QYKVKQGDSLYVVAKRFNVEMQHLKRWNPRMGK-ALKPGQMLTVY 463
              YKVK GDSL+++AK+  V +  L +WN    K  L  GQ L ++
Sbjct: 400 KLSYKVKSGDSLWLIAKQHKVSVAKLAKWNGMAPKDPLSIGQKLVIW 446