Pairwise Alignments

Query, 466 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (750), Expect = 9e-84
 Identities = 188/516 (36%), Positives = 263/516 (50%), Gaps = 78/516 (15%)

Query: 5   IAVAVSATLAGCQSTSQLPQTDAAHTPNIAARAKQKPVWLTEKPSPQVPQDVWERMRQGF 64
           + V   A L GCQ+     Q        +         +L  +P      DVWER+RQG 
Sbjct: 7   VVVGGFALLTGCQTLDN-HQVTKPEAQTVTTENTVPQYYLATEPESAQVTDVWERIRQGM 65

Query: 65  QLQETAGVNPRIEQQRLWFASNPSFMENAGERGSLYIHYIVERLEERNMPLELALLPVIE 124
           QL         +   R W+ +NP  +E   ER + Y++ IVE LE+R++P+E+ALLP+IE
Sbjct: 66  QLPVPD--KKLVNYYRDWYINNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLPIIE 123

Query: 125 SAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAALDYLTRLHDMFN 184
           SA++P A S + A GLWQF      +F L    +YDGRRD+ ASTTAALD L  L++  N
Sbjct: 124 SAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYNKTN 183

Query: 185 GDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPSETQAYVPKLLALSQVVLSPD 244
            +WL A+AAYN GE  V  AI+RNE  GL TD+W+L LP ET+ YVP+LLAL++V+   D
Sbjct: 184 NNWLYAIAAYNTGESKVLNAIKRNEDKGLKTDFWSLDLPKETKRYVPQLLALAEVIKHAD 243

Query: 245 AYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRTTID-GPQHL 303
            YG+ L PI N P  +VV+I+ ++DL+  A +AN+   EL +LNP + +  T   GP  L
Sbjct: 244 EYGITLAPINNSPSIEVVDIDSQIDLAMAAGLANMTTTELAKLNPGYNRWATSPLGPHTL 303

Query: 304 LVPTSKAQLLTASLSTMRPEELIS------------------------------------ 327
           ++P  K++    +L+    E  +S                                    
Sbjct: 304 VLPIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGSIAQKHHTTVNAIRAANGMKSNN 363

Query: 328 ----QRALKPVFESADDSEV-----------------EGARRTYRVKRGDNLAQIAKANN 366
               +  + PV  SADD ++                  G + TY+VK GD+L QIA+A+N
Sbjct: 364 IVAGRHLIIPV--SADDKQLYALSTSQKLPKKAAGATSGNKLTYQVKSGDSLWQIAQAHN 421

Query: 367 VQTKDLQRWNKLS-GNKLKVGQTLVMQDAKASKARGKRISTVVAANSKDQKKQTQYKVKQ 425
           V  K L  WN LS  +KL+ GQ L +  A   K   + I TV             YKVK 
Sbjct: 422 VSVKQLTAWNHLSKDSKLQTGQKLTIV-APQEKLDSEHIRTV------------SYKVKS 468

Query: 426 GDSLYVVAKRFNVEMQHLKRWNP-RMGKALKPGQML 460
           GDSL  +A +F V +  L  WN     + + PGQ+L
Sbjct: 469 GDSLAQIASKFKVTVAELLEWNSLTPSQYILPGQVL 504