Pairwise Alignments

Query, 466 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 431 a.a., membrane-bound lytic murein transglycosylase D presursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  161 bits (407), Expect = 5e-44
 Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 20/307 (6%)

Query: 98  SLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTR 157
           + Y+    E L+   +PLEL  LP+IESA NP A SRA A GLWQF+  TG+ + L    
Sbjct: 126 NFYMPIFEEALDAYGLPLELKYLPIIESALNPSAVSRAGASGLWQFMIGTGKIYGLESNS 185

Query: 158 FYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDY 217
             D RRD   +T AA  YL  ++D++ GDW L +AAYN G GT+++AI R    G  TDY
Sbjct: 186 LIDERRDPIKATWAAARYLKEMYDIY-GDWNLVIAAYNCGPGTINKAIRR---AGGETDY 241

Query: 218 WNL--PLPSETQAYVPKLLALSQVVLSPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAA 275
           W +   LP ET+ YVP  +A + V+     + +             V++ + +   ++A 
Sbjct: 242 WKIYNLLPKETRGYVPAFIAANYVMTYYCDHNICPMETNIPASTDTVQVTKNLHFEQIAE 301

Query: 276 VANIDEDELFQLNPAFKQRTTIDG---PQHLLVPTSKAQLLTASLSTM---RPEELISQR 329
           + N+  +E+  LNP +K++  I G   P  L +P            T+   R +EL   R
Sbjct: 302 LCNVPLEEVKSLNPQYKKQ-VIPGTTKPCTLRLPQGAISTFIDKQDTIYAHRADELFRNR 360

Query: 330 ---ALKPVFESA--DDSEVEGARRT--YRVKRGDNLAQIAKANNVQTKDLQRWNKLSGNK 382
              A+K V  +     S V G  +   Y++K GD L+ IA+   V+ KD+Q+WN +S  +
Sbjct: 361 KTVAVKEVTPTTRRQTSAVAGKGKLTYYKIKSGDTLSSIAEKLGVRVKDIQQWNGMSNTR 420

Query: 383 LKVGQTL 389
           +  G+ L
Sbjct: 421 IAAGKQL 427