Pairwise Alignments

Query, 388 a.a., Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) from Pseudomonas fluorescens FW300-N2E2

Subject, 376 a.a., succinyl-CoA synthetase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  327 bits (839), Expect = 3e-94
 Identities = 171/384 (44%), Positives = 236/384 (61%), Gaps = 8/384 (2%)

Query: 1   MNLHEYQGKQLFAEYGLPVSTGYAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKAGGV 60
           M +HEYQ K++F++YG+PV       T   A  A  ++G    V+KAQV  GGRGKAGGV
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGAVAAYKRMGSDRVVIKAQVLTGGRGKAGGV 60

Query: 61  KLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRR 120
           KLV + ED    A+  LG  +        G PV +ILV    DIA E Y+   +DR++R 
Sbjct: 61  KLVDNTEDTYQEAKNILGMSI-------KGLPVNQILVSEAVDIAAEYYVSFTIDRNTRS 113

Query: 121 IVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLEGKQVTQFAKI 180
           ++ M S  GG+DIE++A  +PEKI++  IDP +G   +  R  AF L    +Q  + A I
Sbjct: 114 VILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPHIEQAGRMAAI 173

Query: 181 FVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTFHDPSQDDP 240
              L K+F ++D +L+EVNPL + A G L  +DAKI  D NA+YR P + +  DP++++ 
Sbjct: 174 LQALYKIFMENDASLVEVNPLALTAKGILMAIDAKIVFDDNALYRHPDVLSLFDPTEEEK 233

Query: 241 REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300
            EA A     +YV ++GNIGCMVNGAGLAM TMD++ LHGG PANFLD+GG +   +V E
Sbjct: 234 VEADAKNKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLHGGNPANFLDIGGSSNPVKVVE 293

Query: 301 AFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKV 360
           A K++L D  V  VL+NIFGGI RCD +A G+I A  ++   IPV+VRL G N  LG  +
Sbjct: 294 AMKLLLQDEKVKVVLINIFGGITRCDDVAIGLIQAFDQIKSDIPVIVRLTGTNEHLGRDL 353

Query: 361 LAESGLNIIAATSLTDAAQQVVKA 384
           L         AT++ +AA   +K+
Sbjct: 354 LRNHS-RFQIATTMQEAALMAIKS 376