Pairwise Alignments

Query, 284 a.a., Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 285 a.a., glycine/betaine/L-proline ABC transporter, periplasmic-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  203 bits (517), Expect = 3e-57
 Identities = 112/286 (39%), Positives = 167/286 (58%), Gaps = 5/286 (1%)

Query: 3   MRRLLGAGAALVLAISSTL--ASAETKTLSIGYVDGWSDSVATTHVAAEVIKQKLGYDVK 60
           M++++    A +LA +     AS + K + I YV+ W  + AT+++    I+ +L   V+
Sbjct: 1   MKKIILLAVAFLLAFTGAAQAASKDAKPVRIAYVE-WDCARATSNLVKAAIEDRLHRKVE 59

Query: 61  LQAVATGIMWQGVATGKLDAMLSAWLPVTHGDYWTKNKDQVVDYGPNFKDAKIGLIVPEY 120
           L  V+ G MW  VA+G +DA ++AWLPVTHGDY  + + +V D GP    A++G  VP+Y
Sbjct: 60  LLPVSAGAMWMAVASGDVDATVTAWLPVTHGDYLKRLEGKVRDLGPLVDGARLGWAVPDY 119

Query: 121 VKAKSLEDLKTD-DSFKKRIVGIDAGSGVMLKTEQAIKDYDLTGYQLKASSGAGMIAELT 179
           V   S+ +L    D F  RI+GID G+G+M  +E AIK Y L   QL   SGA M A L 
Sbjct: 120 VTVNSIAELDAAADRFGGRIIGIDPGAGLMRMSEDAIKAYGLKKMQLVEGSGATMTAALA 179

Query: 180 RAEKKNESIAVTGWVPHWMFAKWKLRFLEDPKGVYGAAETVNSIGSKELGAKAPEVAEFL 239
            A ++ E I VT W PHWMF +W+L++L+DPKG  G  E+++++  K L    PEV  FL
Sbjct: 180 DAIRRKEWIVVTAWSPHWMFGRWQLKYLDDPKGALGGMESIHTVVRKGLDKDMPEVFAFL 239

Query: 240 KKFQWASKDEIGEVML-AIQEGAKPDAAAKDWVAKHPDRVKEWTGK 284
            +F +A   ++  +M    +EGA P   A+ ++ +HP  V  W  K
Sbjct: 240 DRFAYADTAQLQTLMAWNNEEGADPLTNARRFMKEHPALVDSWLAK 285