Pairwise Alignments

Query, 304 a.a., Membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  343 bits (881), Expect = 2e-99
 Identities = 183/301 (60%), Positives = 230/301 (76%), Gaps = 16/301 (5%)

Query: 1   MAGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAERELPVVWA 60
           MAG+SLL L+DDIA++LDDVA+M+K+AAKKTAGVLGDDLALNAQQV+GV A+RELPVVWA
Sbjct: 1   MAGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60

Query: 61  VAKGSFINKLILVPSALAISAFVPWLVTPLLMVGGAYLCFEGFEKLAHKFLHSPAEEQAE 120
           VA GSF NKLILVP+A+ ISAF+PW VTPLLM GG +LCFEGFEKL H + H     + +
Sbjct: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSH----RKDK 116

Query: 121 HAQLVEAVADPAVDLVAFEKDKIKGAVRTDFILSAEIIAITLGTVADAALTQQVIVLSGI 180
           HA+  E+      DL A+EK+K+KGA+RTDF+LSAEIIAITLG VAD +LT Q   L+ I
Sbjct: 117 HAEQGESDLPEISDLAAYEKEKVKGAIRTDFVLSAEIIAITLGIVADKSLTTQFFTLAII 176

Query: 181 AIVMTIGVYGLVAGIVKLDDLGLWLTQKPGQAA-----KSIGGAILSAAPYMMKSLSVIG 235
            IVMTIGVYGLVA IVK+DD GL+L+Q  G+++     + +G  +LSAAP +MKSL++IG
Sbjct: 177 GIVMTIGVYGLVAAIVKMDDAGLYLSQCQGESSFTRFNRKLGFGLLSAAPVLMKSLTIIG 236

Query: 236 TAAMFLVGGGILTHGV----PVVHH---WIEGVTASAGGAGFIVPMLLNAVAGIVAGAAV 288
           TAAMF+VGGGILTHG+      +HH   ++E +       G + P +LNA+ GI AGA  
Sbjct: 237 TAAMFMVGGGILTHGLHWVGEQIHHAEQFVETIAVVGPVLGLLTPSVLNALFGIAAGAVA 296

Query: 289 L 289
           +
Sbjct: 297 V 297