Pairwise Alignments

Query, 209 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N2E2

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  139 bits (351), Expect = 3e-38
 Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 1/197 (0%)

Query: 1   MNLETWLLFSGAALVVILIPGPLSLLMIGNSLNYGLRRSYPAFLGGVIASICLLSASALG 60
           M  ETWLL+  A +++ + PGP+++L + + +++G +RS    LG V A++ L++ASA G
Sbjct: 1   MQTETWLLYFFAIVLIGISPGPIAMLSMSHGIHFGKKRSIATGLGSVSAALILMAASAAG 60

Query: 61  LGALLMASEQLFSALKIVGALYLFYLAWQSWQQSRQPSQGAEVPQAAAVPRFGALFGRAF 120
           LGA++ ASE  F+ LK  GA YL +L  +    ++Q  Q  EV +         LF +AF
Sbjct: 61  LGAIISASEYGFTILKWCGAAYLVFLGIKLLL-TKQQGQTLEVVKTEGKGTLKQLFKQAF 119

Query: 121 VLGASNPKDILFFAAFLPQFLSAEQAFLPQLLIMIATWTVLDLLCKLAYGLGAHGAARYL 180
           ++G SNPKD+LFFAA  PQF+      LPQL I+  TW ++D    + Y   A+  A  L
Sbjct: 120 LVGISNPKDLLFFAALFPQFIDLTAPQLPQLTILALTWALVDFSFVMIYASMANVLAPSL 179

Query: 181 RTGKGQSWFNRISAGLF 197
           +      WF+R S G+F
Sbjct: 180 KASNKLHWFDRTSGGVF 196