Pairwise Alignments

Query, 274 a.a., tRNA(Cytosine32)-2-thiocytidine synthetase from Pseudomonas fluorescens FW300-N2E2

Subject, 311 a.a., PP-loop domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 59.7 bits (143), Expect = 8e-14
 Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 32/238 (13%)

Query: 17  RLAGEAVADFNMIEDGDKVMVCLSGGKDSYTLLDVLMHLQKVAPIKFDIVAVNMDQKQPG 76
           R     + +  +    D+++V LSGGKDS +L+  L  L       +D+  +++D   PG
Sbjct: 32  RQVERGIKERKLFTHDDRILVALSGGKDSLSLMLELSRLG------YDVTGLHIDLAIPG 85

Query: 77  FPEHVLPAYLESLGVEYHIVEKDTYS-VVKELIPEG-----------KTTCSLCSRLRRG 124
                 PA   + GV     EK   + +VKE+  EG           +  CS C +++R 
Sbjct: 86  SS----PA---ARGVVERFCEKHGLNLIVKEMGAEGLAIPDVKARLNRPVCSACGKIKRY 138

Query: 125 TLYTFADEIGATKMALGHHRDDIVETFFLN--MFYNGSLKAMPPKLRADDGRNVVIRPLA 182
                A +   T +A GH+ DD +   F N   +    L    P L AD G    ++PL 
Sbjct: 139 FFNKTALDENFTVLATGHNLDDEIARLFSNTLRWDVAYLSDQGPDLAADGGFARKVKPLW 198

Query: 183 YCSEKDIQAYSDFK--QFPIIPCNLCGSQENLQRQVVKEMLQEWERKTPGRTESIFRG 238
             SE +   Y+     +    PC   G          K++L + E + PGR    ++G
Sbjct: 199 RLSEFETANYAFLMGIEHHYAPCPYSG---GASFTFYKKLLTDLEEEMPGRKLDFYQG 253