Pairwise Alignments

Query, 332 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

Subject, 343 a.a., helix-turn-helix domain containing protein, AraC type from Marinobacter adhaerens HP15

 Score =  337 bits (863), Expect = 3e-97
 Identities = 166/333 (49%), Positives = 227/333 (68%), Gaps = 2/333 (0%)

Query: 1   MRQRTIASHFARAALGGARRQGFDYVPVLQQLGISPELLDEPRARIAPEQFARLLQALWL 60
           M   T++ HF +AALGGA R GFD   +L++ GISP+LL    AR++ +QF+ L+Q LW 
Sbjct: 5   MSDLTVSKHFVQAALGGAERLGFDTREMLREAGISPDLLRIEMARVSSDQFSHLMQVLWN 64

Query: 61  ALGDEYLGFGRAASKPGTFAMMCHALIHCRTLGKALQRGLLFYSLFPDAPSLTLEAEGER 120
            +GDE++G G   ++ GTFA MC  +I C  L    ++   F  LF    S+ LE   ++
Sbjct: 65  RMGDEFMGLGPRRARTGTFATMCALVIDCPNLESVYRQAFQFSRLFEPMVSMELEIGEDK 124

Query: 121 VRLVLD-DSTLWDPDHFLTESLLVVWHRLASWLIGQRIGLEQATFGYTKPAHGAEYDLLF 179
            RLV   +  + DP  FL ES+LV+WHRL SWLIGQ I LE+A F Y +P HG EY  +F
Sbjct: 125 ARLVARMEGEINDPSFFLRESILVIWHRLGSWLIGQPIELEKAEFDYPRPPHGDEYRHIF 184

Query: 180 SCPLVFEARSSSLLFHSRYLGMPLLQDERTLKHFLERSPADLLSRPDDGHSLSSQLRRLL 239
            CPL FE+   +L F  R+L  P+++D+  ++ FL+ SPADLLSRPD+ ++ + ++R L+
Sbjct: 185 HCPLAFESDRIALTFDKRFLSAPVIRDKPEMRQFLKTSPADLLSRPDESNTFTGRIRALI 244

Query: 240 SRDTAR-WPDLDTVAGHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQ 298
            RD ++  PD + +A  LH SPQTLRR L++E TSFQE+KD LRRD+AIY+L R DL + 
Sbjct: 245 GRDFSKPLPDFEWIAAELHTSPQTLRRRLKQENTSFQEIKDLLRRDMAIYYLSRQDLPIN 304

Query: 299 QIAEQLGFSEPSAFHRAFKKWTGLTPGAYREQE 331
            IA ++GF+EPS FHRAFKKWTG+TPGAYRE E
Sbjct: 305 DIAAKVGFTEPSTFHRAFKKWTGVTPGAYREGE 337