Pairwise Alignments

Query, 199 a.a., outer membrane protein H1 from Pseudomonas fluorescens FW300-N2E2

Subject, 211 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.7 bits (156), Expect = 1e-15
 Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 60  DTTYGLRLGKQ-NDQGRYYATYDNVSGTHNGIKLRQENLLGSYDVFYPVTSSTKL--FGG 116
           D  Y LR G   ND  R Y TY   S        +Q++ L SYD    + ++ K   F G
Sbjct: 76  DMIYELRGGVYLNDNNRVYGTYSYNSDDF----AKQQSFLMSYDYLVGLDANNKFNWFIG 131

Query: 117 GTAGLTKLTQDSPGFSRDSDIGYAVGLQGGVLQQISQNTSVELGYRYLRSNASTEMSPHG 176
            TAG+  ++ D+     +S   +  G Q G + +I+ + S E+GYRYL+ +     +   
Sbjct: 132 ATAGVNHVSPDTDVL--ESKNRFVWGGQTGFMYKINDSLSTEIGYRYLKQDYERSFASDA 189

Query: 177 GDKVGSLDLTSSAQTYLSANYTF 199
           GDK  S  L  S Q YLS +Y F
Sbjct: 190 GDK-ASFSLDDSQQVYLSVDYRF 211