Pairwise Alignments

Query, 536 a.a., Sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 440 a.a., sensor protein RstB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  159 bits (401), Expect = 3e-43
 Identities = 99/293 (33%), Positives = 147/293 (50%), Gaps = 13/293 (4%)

Query: 246 IGLIVYLLVRQLERRLRGLESAATQIAQGSLETRVPARGADSVGRLAAAFNGMAEHLQQL 305
           +  +  + V  L R L  L  A     +   +TR+       V  LA  FN MA H+  L
Sbjct: 156 LAFVALIWVGPLSRDLSILRKATKDFGEAKWDTRINLSNRSQVKPLANTFNEMARHISAL 215

Query: 306 LAIQRELVRAVSHELRTPVARLRFGLEMLGSATTP----QARDKYLAGMDHDIEDLDRLV 361
           +  Q+ L  AVSHE+RTP+ARL+F L ++     P    Q R  +L  M  DI++++ L+
Sbjct: 216 IENQKHLSNAVSHEIRTPLARLKFALALMPMYCKPDSDEQTRQDFLNEMQLDIKEMENLL 275

Query: 362 DEMLTYARLEQGSPALNFQRVDLDALVNQVIDELGPLRAGITVERGLCLSAVDCDGAWVE 421
            E+LTYA LE     +     DL  L+NQ I  L  L      E  + L A D D   + 
Sbjct: 276 QELLTYASLESQREGIPLDEYDLITLINQCIKRLSTLS-----ETPITLHA-DMDALPLV 329

Query: 422 AEPRFLHRALQNLVGNAMRHASSRVTVSYQVGQLRCRVDVEDDGPGVPEAAWERIFKPFL 481
            EP  + RALQNL+ NA R A  ++ +       R  + V +DG  +PE    ++F+PF 
Sbjct: 330 GEPALIERALQNLLTNAQRFARHQILIEVSQTPQRVTLSVSNDGEPIPEVDLPKVFEPFY 389

Query: 482 RLDDSRARASGGHGLGLSIVRRIIHWHDGRALIGKSKSLGGACFSLSWPRHQD 534
           R   S    + GHGLGL+I++RI+  H G   +  + +     F+LSWP+ ++
Sbjct: 390 R-SQSVQNGNKGHGLGLAIIKRIMQRHQGEVSVSSNPT--QTRFTLSWPKKRE 439