Pairwise Alignments

Query, 441 a.a., Flagellar hook protein FlgE from Pseudomonas fluorescens FW300-N2E2

Subject, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  288 bits (738), Expect = 2e-82
 Identities = 166/439 (37%), Positives = 242/439 (55%), Gaps = 49/439 (11%)

Query: 1   MSFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATKLGSGSKTVGNGVR 60
           MSFNI L+GL A N+QL+  GNNIAN  T GFKSSR  F  +Y+ T+          GV 
Sbjct: 1   MSFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAETQ--------AMGVE 52

Query: 61  LANVSQQFGQGD-VNNTGNVLDMGIQGQGFFVL-SNDGSLSYTRAGTFKTDKEGFITNSD 118
           +   +Q   QG  + +T   LD+ I G GFFV  +++G + YTRAG F TDK+ +ITNS 
Sbjct: 53  VIGTTQSISQGGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKDSYITNSL 112

Query: 119 GTARLQGYGVDANGKIQNGILTDLRIDTSNLPPQATSLVSSTINLNSTATPITVAFNPTD 178
           G  RLQGY  DA G +Q G + DL++ +  +P +AT  +S   NL++     TVAF+P  
Sbjct: 113 GQ-RLQGYPADATGNLQTGTVGDLQLRSGGIPARATDALSFVANLDANQEVPTVAFDPLA 171

Query: 179 TATFTKQFTTPVYDTQGNQHSMDQYMVKTAGNTWNVYTLIDGRNLNGSAPVAPNAPVPST 238
             ++   +TT +YD+QG +H++ QY VKTA N WN +  +DG  L G+         P  
Sbjct: 172 ADSYNSTYTTKLYDSQGKEHTLTQYFVKTADNNWNAHYYVDGAALAGA---------PQA 222

Query: 239 MTFDSNGRLTQVSTPVPPTVPPTVPTPAPTISNDLNLVGWVPGTVTNGTWTANGAGSSTI 298
           +TFD++G L   +TP+                          GTV        G     I
Sbjct: 223 LTFDTSGVL---ATPI--------------------------GTVALAAPLTGGVAPLAI 253

Query: 299 TISMANTTQFNADTARSIPAQNGYATGQITNLTIDGSGVLLANFSNNQTKPIGQLALASF 358
            +  + T+Q+ ++ + +     GYA G+ T ++++  G + A++SN +    GQ+ LASF
Sbjct: 254 QLDYSGTSQYGSEFSVTNNRATGYAAGEQTGMSVEKDGKVYASYSNGERMLQGQVVLASF 313

Query: 359 TNEQGLQPVGGTSWKETFASGIPGYDAPETGTLGSIVSNSLEESNVNLTNELVELIKAQS 418
            N +GL+ + GT+W ET ASG     AP  G  G++ S +LE SNV+LT +LV L++ Q 
Sbjct: 314 VNAEGLKNISGTAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQR 373

Query: 419 NYQANAKTISTQSTIMQTI 437
           NYQAN + IST   + Q +
Sbjct: 374 NYQANTQVISTNKELTQVL 392