Pairwise Alignments

Query, 441 a.a., Flagellar hook protein FlgE from Pseudomonas fluorescens FW300-N2E2

Subject, 453 a.a., flagellar hook protein FlgE (RefSeq) from Shewanella loihica PV-4

 Score =  280 bits (717), Expect = 5e-80
 Identities = 180/462 (38%), Positives = 256/462 (55%), Gaps = 32/462 (6%)

Query: 1   MSFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATKLGSGSKTVGNGVR 60
           MSFNI LSG+ AA K L+ T NNIANV TTGFK SRAEF DVY+++   +   TVG GV 
Sbjct: 1   MSFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVT 60

Query: 61  LANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSND-GS--LSYTRAGTFKTDKEGFITNS 117
            A V+QQF QG +  T N LDM I G GFFV S++ GS  LSYTRAG FK D + ++ NS
Sbjct: 61  TAQVAQQFQQGSLQFTSNALDMAINGGGFFVTSSEVGSQDLSYTRAGAFKVDADSYLVNS 120

Query: 118 DGTARLQGYGVDANGKIQNGILTD---LRIDTSNLPPQATSLVSSTINLNSTATPITVA- 173
            G   LQ + VD +G   +  LT    ++I  +   PQ T  +   +NLN+    +  A 
Sbjct: 121 AGNY-LQTFPVDKDGNSTSVSLTTTQPVKIPDTAGSPQKTDNIGIQMNLNAGEGTLDPAN 179

Query: 174 FNPTDTATFTKQFTTPVYDTQGNQHSMDQYMVK------TAGNTWNVYTLIDGRNLNGSA 227
           FNP D  T+    +  +YD+ G  H +  Y V+      T  + W  +  +DG+ ++   
Sbjct: 180 FNPNDPDTYNNSTSVTMYDSLGEPHILTTYFVRPPEAAYTGTSNWVAFYAVDGKQVD--- 236

Query: 228 PVAPNAPVPSTMTFDSNGRLTQVSTPVPPTVPPTVPTPAPTISNDLNL-VGWVPGTVTNG 286
                A    T   D+ G     ST     V  +    +    ND     G  P  +T  
Sbjct: 237 ----LAGAAGTYGRDTTGDGVADSTGT--AVNASGWKGSVLSFNDTGAYTGSDPAVITTE 290

Query: 287 TWTANGA--------GSSTITISMANTTQFNADTARSIPAQNGYATGQITNLTIDGSGVL 338
           T    GA        GS T+T++  + TQ+ +    +  +Q+G   G++TN+ +   G++
Sbjct: 291 TLGVGGANVLGPGTDGSQTLTLNFNSPTQYASPFEVTELSQDGTTVGRLTNVEVGADGLI 350

Query: 339 LANFSNNQTKPIGQLALASFTNEQGLQPVGGTSWKETFASGIPGYDAPETGTLGSIVSNS 398
            A++SN  T P+ ++ALA F+NEQGL  VG TSWKE+  SG        +GT GSI S++
Sbjct: 351 NASYSNGSTVPLARVALARFSNEQGLTQVGNTSWKESLDSGPALAGEANSGTFGSIRSSA 410

Query: 399 LEESNVNLTNELVELIKAQSNYQANAKTISTQSTIMQTIIQM 440
           LE+SNV+LT ELV+LI AQ N+QAN++T+   +T+ QT++Q+
Sbjct: 411 LEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452