Pairwise Alignments

Query, 441 a.a., Flagellar hook protein FlgE from Pseudomonas fluorescens FW300-N2E2

Subject, 498 a.a., flagella basal body rod domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  159 bits (403), Expect = 1e-43
 Identities = 134/506 (26%), Positives = 225/506 (44%), Gaps = 88/506 (17%)

Query: 6   GLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATK-----LGSGSKTVGNGVR 60
           G +G+    + ++V GNN+ANV T GFK S   ++D+ S T+       SG   VG G R
Sbjct: 8   GATGMRTQAEGMNVVGNNLANVNTIGFKQSMMLYQDLMSQTEPTGSAYVSGISQVGLGAR 67

Query: 61  LANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSNDGSLSYTRAGTFKTDKEGFITNSDGT 120
           + +V     QG +    +  D  I G+GFF +++     YTRAG F+ +K+G + + +G 
Sbjct: 68  VGDVRVLRSQGALLAGSDTTDFAISGKGFFQVTSGQDTHYTRAGNFRFNKDGQLVDPNG- 126

Query: 121 ARLQGYGV--DANGKIQNGILTDLRIDTSNLPPQATSLVSSTINL-------NSTATP-- 169
             L G+ +  +  G +    L        ++P +AT  ++S  NL       +STA P  
Sbjct: 127 FNLMGHAITGETEGPLAAVTLVKDADGRLSMPAKATGGMTSVFNLGFDKDASSSTANPFF 186

Query: 170 -ITVAFNPTDT-------ATFTKQFTTPVYDTQGNQHSMDQYM--VKTAGNTWNVYTLI- 218
            +  A++ T T       A +T+  T  VYD  G+ H +        TAG    V  L+ 
Sbjct: 187 GMLEAWDGTATPPLGDNAAGYTQ--TMRVYDAAGDTHELTIRFDNATTAGGKRYVEFLVT 244

Query: 219 -----DGRNLNGSAPVAPNAPVPSTMTFDSNGRLTQVSTPVPPTVPPTVPTPAPTISNDL 273
                DG    GSA       +  T+ F S+G+L  +    P    P             
Sbjct: 245 MPPGEDGGAAAGSA--GAGLLMSGTLQFGSSGQLQDIMAFTPSGGDPK------------ 290

Query: 274 NLVGWVPGTVT-------NGTWTANGA--------------------------------G 294
           +L  WVP T+        N T+   GA                                G
Sbjct: 291 DLANWVPATLDASGRPQFNATFAQGGAQTVGLDLGITTTAWNNAPASAAGVGLDPTLLGG 350

Query: 295 SSTITISMANTTQFNADTARSIPAQNGYATGQITNLTIDGSGVLLANFSNNQTKPIGQLA 354
           ++T  ++  +TT +   ++ +   Q+GYA G + NL +   G++   +SN Q++ + ++ 
Sbjct: 351 ATTPKLAATSTTAYKGSSSSTYMKQDGYAEGVLMNLEVATDGIVSGKYSNGQSQSLFRVP 410

Query: 355 LASFTNEQGLQPVGGTSWKETFASGIPGYDAPETGTLGSIVSNSLEESNVNLTNELVELI 414
           +  FT+E GL+  G   +  T  SG       +T   G ++  SLE+SNV++  E+V +I
Sbjct: 411 IFRFTSEDGLRSEGMNHYSATTESGAAQEGKADTENYGKLMGKSLEQSNVDMAREMVNMI 470

Query: 415 KAQSNYQANAKTISTQSTIMQTIIQM 440
             Q  +Q N+K ++T  T++Q  +++
Sbjct: 471 VTQRGFQTNSKVVTTADTMIQKALEL 496