Pairwise Alignments

Query, 441 a.a., Flagellar hook protein FlgE from Pseudomonas fluorescens FW300-N2E2

Subject, 564 a.a., flagellar hook protein FlgE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  195 bits (495), Expect = 4e-54
 Identities = 161/555 (29%), Positives = 245/555 (44%), Gaps = 122/555 (21%)

Query: 6   GLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSA-TKLGSGSKTVGNGVRLANV 64
           G+SGL A  ++++V GNNIANV T GFK SR +FED  +  T   +G   VG GV +  +
Sbjct: 10  GVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVSIGAI 69

Query: 65  SQQFGQGDVNNTGNVLDMGIQGQGFFVLSNDGS--LSYTRAGTFKTDKEGFITNSDGTAR 122
              + QG    T    D+ IQG+GFF +   G+    YTRAG F+ D +G++ +  G   
Sbjct: 70  FGDYSQGAFQTTNESTDLAIQGRGFFSVKPKGTEDTYYTRAGNFRFDADGYLVDPHGYV- 128

Query: 123 LQGYGVD---------------ANGKIQ-NGILTDLRIDTSNLPPQATSLVSSTINL--- 163
           LQG+ ++                  KI+ +G+  D+++D     PQ T  ++  +NL   
Sbjct: 129 LQGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQHTQNITLNVNLDSN 188

Query: 164 ------NSTATPITVAF------NP-TDT------ATFTKQFTTPVYDTQGNQHSMDQYM 204
                 +ST  P    F      NP T T      + F  Q T  VYD  G  H++  Y 
Sbjct: 189 PGNDKSSSTTNPYFSLFETWNGQNPLTGTQPALAQSAFAYQSTIKVYDEAGTAHTLTVYF 248

Query: 205 VKTAGNT----------WNVYTLI----DGRNLNGSAPVAPNAP---VPSTMTFDSNGRL 247
            +   ++          W     +    D R + G+A     A    +  T+TFD+ G+L
Sbjct: 249 DQVDPDSVTNEPNGRKQWEYIVTMDPAEDKRVIAGTAMNTTRAAGLLMTGTLTFDTTGQL 308

Query: 248 T---------QVSTPVPPTVPPTVPTPAPTISNDLNLVGWVPGTV--------------- 283
                     Q +   PP   PT P P P ++   +LV W P  +               
Sbjct: 309 VDQTAFTPFGQYTDTTPPWNEPT-PNPGPPVTTPADLVNWQPTQMSSNGLPMMVANFSGL 367

Query: 284 ------------------------TNGT--WTA--NGAGSST-------ITISM---ANT 305
                                   TN T  WT+  N A   T       +T S    + T
Sbjct: 368 TDSSVVGSPTAQNFLMELDLGLRSTNATTPWTSTPNAAAIGTDASLLPGLTSSQRQPSAT 427

Query: 306 TQFNADTARSIPAQNGYATGQITNLTIDGSGVLLANFSNNQTKPIGQLALASFTNEQGLQ 365
           T +   ++     Q+GY  G + N+T+D  G++   +SN  T  + Q+ L  FT++Q L+
Sbjct: 428 TSYAGSSSTQFQKQDGYTFGFLQNITVDRDGIMQGKYSNGVTLDLYQVTLVDFTSKQNLR 487

Query: 366 PVGGTSWKETFASGIPGYDAPETGTLGSIVSNSLEESNVNLTNELVELIKAQSNYQANAK 425
             GG  +  T  SG P      +  LG+I SNSLE+SNV+L  E VE+I  Q  +Q+N+K
Sbjct: 488 REGGNLFSGTRDSGDPLPGPANSNGLGAISSNSLEQSNVDLAREFVEMITTQRGFQSNSK 547

Query: 426 TISTQSTIMQTIIQM 440
            I+T  T+++ ++ M
Sbjct: 548 VITTTDTMLEVVVNM 562