Pairwise Alignments

Query, 240 a.a., Flagellar basal-body rod modification protein FlgD from Pseudomonas fluorescens FW300-N2E2

Subject, 260 a.a., flagellar basal body rod modification protein (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 2e-37
 Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 41  KELGKDAFLQLLVTQLKNQNPLEPQDNGEFVAQLAQFSSLEGITTLNETVSGIAGNYNSS 100
           +EL ++ F  LL  QL  Q+P +P DN + +AQ+A FS+++GIT LNE +  +     SS
Sbjct: 59  QELTQEDFFSLLSQQLSMQDPFKPVDNDQMIAQMASFSTVDGITKLNEEIVNLNTVMTSS 118

Query: 101 QALQASSLVGRSVIAPGDKAVVDTSKS-LNGTVVVPTSVSSVAVKIVDKDGKTVRTIDLG 159
           QALQAS LVG+ V+ P D   +      L G +  P  + S+ V+I D+ G+ V+T  + 
Sbjct: 119 QALQASGLVGQKVLIPSDTGHISAEDPVLKGVISTPEPIESITVRIEDEKGQLVKTFTVD 178

Query: 160 SQNAGNSAFIWDGKNDAGTVVESGTYTFAASTTIDGKATSLITNLPATVSSVTISQTGGE 219
             + GN    WDG +  G  V SG Y+  AS  +DGK+  L  +  A V+SV++      
Sbjct: 179 GSDGGNIDVSWDGLDKDGEPVASGNYSIKASGKVDGKSEDLAVSTYAHVTSVSLGTASTG 238

Query: 220 LMLNLAGLGSIALSKVQTI 238
            +LNL G+G I L  V  +
Sbjct: 239 AILNLRGIGGIKLGDVLAV 257