Pairwise Alignments

Query, 202 a.a., Transcriptional regulator, TetR family from Pseudomonas fluorescens FW300-N2E2

Subject, 206 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 66.2 bits (160), Expect = 4e-16
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 4/201 (1%)

Query: 3   VPQRLTERKREAILQAAIAEFRSSGFEITSMDKIAATAGVSKRTVYNHFPSKEELFAEIL 62
           +P   +E+K++ +L AAI  F   GF  TSMD++A  AGVSK+TVY+H+ SK++LF   +
Sbjct: 7   IPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDDLFVAAI 66

Query: 63  NRLWNSITAEQDMPYSPRKPLREQLQTLLQAKLHMLADENFLDLARIAIAATIHSPERAR 122
                      D+  +P +P     +  LQ    M+     + + +  +A +   PE +R
Sbjct: 67  ESKCVGHNLNADLLSNPSQPEATLTEFALQFG-EMIVSPEAITVFKACVAQSESHPEVSR 125

Query: 123 DMVSRMGQREEG-LTAWIRQAQADGRLKPVEPAFAAQQMHGLL-KTFAFWPQVSMGQPSL 180
                  Q     LT ++   +A G  +  +P   A ++  +L        ++ +   SL
Sbjct: 126 LFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHCAVRLCLMLFGELKLRLELGLETESL 185

Query: 181 TQEEQAQVIESALDMFLSRYQ 201
             E + Q I    +MFL  Y+
Sbjct: 186 LGERE-QYIRGCAEMFLKAYR 205