Pairwise Alignments

Query, 382 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 418 a.a., efflux RND transporter periplasmic adaptor subunit from Dyella japonica UNC79MFTsu3.2

 Score =  135 bits (339), Expect = 3e-36
 Identities = 103/347 (29%), Positives = 170/347 (48%), Gaps = 39/347 (11%)

Query: 41  PVSVAVAKAIEQPWQARLPTVGSLKALQGVDLSLEIAGTVQKVQFQSGQKVKAGQPLLQL 100
           PV V V   +++     L  +G+++AL  V ++ ++AG +  ++F+ GQ+VK G  L ++
Sbjct: 54  PVPVTVEPVVKRDVPVYLTALGTVQALNTVTINPQVAGQLMSLKFKEGQEVKQGDVLAEI 113

Query: 101 DSEVESALLETA-------EADLGLAQLDFGRGRQLVGSQAISKGEFDRLSAQLKKNQAT 153
           D     A  + A       +A L  A+ +  R + L     ISK + D    Q+ + QA 
Sbjct: 114 DPRTFQANYQQAVGKRAQDQALLATARANLERSQNLAPQGYISKQDLDTQRNQVSQYQAA 173

Query: 154 VNQLKASLAKKQI-------LAPFSGTIGIRQVDVGDYLASGTVIATLQDLSSLYVDFYV 206
           V    A++A  Q+       ++P  G  GIR VD G+ + + + I T+  L  +YV F +
Sbjct: 174 VEADVAAIASAQVQLGFTKVISPIDGVTGIRGVDPGNLVTTTSTIVTITQLHPIYVMFTL 233

Query: 207 PEQTVPRLAVA-----QPVNVS----VSAYPGQTFVGTISAINPKVEDSTRNVLVRATLA 257
           PEQ +  +  A      P+ V+    V A+P     G +  I+ +++ +T    +R+  A
Sbjct: 234 PEQNLEMVRNAVRGSTDPLQVTALDRVDAHP-IADGGELKVIDNQIDTTTGTFRLRSQFA 292

Query: 258 NPDGKLLPGMFANLQVILPDVAAGIVVPESAVTYTLYGNSMYVVAQKKAADGTVEKDDKG 317
           N    L PG F N+++ +  VA G+V+P  AV     G+ +Y V      D TV    K 
Sbjct: 293 NEKNDLWPGQFVNVRLKVRTVAGGLVIPSQAVQRGPDGDYVYQV----QGDSTV----KM 344

Query: 318 QPVLIAERRFVETGERRDGQVLVTKGVQSGDQVVIAGQIKLDNGTPI 364
           QPV IA       GE  D  V++  G++ GDQ+V  GQ +L  G+ +
Sbjct: 345 QPVKIA-------GEVGDSHVMIGSGLKEGDQIVTEGQFRLKPGSKV 384