Pairwise Alignments

Query, 382 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 360 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (438), Expect = 8e-48
 Identities = 110/354 (31%), Positives = 191/354 (53%), Gaps = 18/354 (5%)

Query: 9   MLGVVLLVVLLLAGYKAF-SIYQQIQMFSAPKPPVSVAVAKAIEQPWQARLPTVGSLKAL 67
           M  +++++ +L AG+  + S+  Q    +  K   +V +A A   P +  +  +G+ KA 
Sbjct: 1   MKKIIIIIAILAAGWFGYQSMQPQAPQQAKVKLTPNVVIAMAAMAPVRDEVEAIGTNKAF 60

Query: 68  QGVDLSLEIAGTVQKVQFQSGQKVKAGQPLLQLDSEVESALLETAEADLGLAQLDFGRGR 127
           + V ++ ++   V  ++F  G  VK G  L+QL +  + A ++ A+  +   Q +  R  
Sbjct: 61  ESVTITPKVTDVVTSLKFDDGDIVKKGDLLVQLQNAEQIAKVKVAQVKVSDNQRELARIS 120

Query: 128 QLVGSQAISKGEFDRLSAQLKKNQATVNQLKASLAKKQILAPFSGTIGIRQVDVGDYLAS 187
            LV S+ +++ E DRL   +   +A + Q ++SL  + I+APF+G +G+RQV VG  +  
Sbjct: 121 SLVTSRTVAELERDRLQTLIDTTRAELEQAQSSLNDRSIVAPFNGRLGLRQVSVGSLVTP 180

Query: 188 GTVIATLQDLSSLYVDFYVPEQTVPRLAVAQPVNVSVSAYPGQTFVGTISAINPKVEDST 247
           GT I TL D+S + +DF VPE+ +  L   + V     A+P + F G + +I+ +V  +T
Sbjct: 181 GTEITTLDDISKIKLDFSVPERFIQDLQPGKQVEAKAVAFPDEIFKGKVISIDSRVNPTT 240

Query: 248 RNVLVRATLANPDGKLLPGMFANLQVILPDVAAGIVVPESAVTYTLYGNSMYVVAQKKAA 307
           R V+VRA + NPD +LLPGM   +++I     A +++PESA+          +  QK+  
Sbjct: 241 RAVIVRAEIPNPDLRLLPGMLMKVKLIKRSREA-LMLPESAI----------IPIQKEHF 289

Query: 308 DGTVEKDDKGQPVLIAERRFVETGERRDGQVLVTKGVQSGDQVVIAGQIKLDNG 361
             +V KD+      + ER+ V  G R  G V +  G++ G+ VVI G +K+  G
Sbjct: 290 VYSVNKDN------VIERKQVTIGIRTRGWVEILGGLEIGENVVIRGLLKVHPG 337