Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator ColR from Pseudomonas fluorescens FW300-N2E2

Subject, 227 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (489), Expect = 3e-54
 Identities = 101/220 (45%), Positives = 145/220 (65%), Gaps = 2/220 (0%)

Query: 2   RILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYT 61
           +IL++EDN D+   L DYL  +G  VD A +G  GL LA   H+D IVLD+MLP +DGY 
Sbjct: 5   QILIIEDNADVAGVLGDYLESQGAQVDYASNGELGLRLATEGHFDAIVLDLMLPKMDGYA 64

Query: 62  LCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYLIKPFALSELAARIEAVMRRAQ 121
           + K LR+      P++MLTA D   D LQGF SGADDYL KPF L EL  R+ A+++R  
Sbjct: 65  VAKALRQQGS-SVPILMLTALDDKQDLLQGFHSGADDYLTKPFDLDELHVRLLALIKRQL 123

Query: 122 GG-GRRALQVGDLSYDLDTLEVTREGKLLKLNPVGLKLLAVLMQKSPHVLRREILEEALW 180
           G   +   Q G L+ ++      R+GK L+L P   ++L +L+ ++P+V++RE + + LW
Sbjct: 124 GRVAQGCQQCGPLTLNIAEHTAYRDGKKLQLTPSCYQILHLLISRAPNVVKREEIVQHLW 183

Query: 181 GDDCPDSDSLRSHVHQLRQVIDKPFDKPLLHTVHGVGYRL 220
           G++ P+SD LRSH++QLR  +DKPFD P++ TV  +G+RL
Sbjct: 184 GEEPPNSDILRSHMYQLRNQVDKPFDTPIILTVPKIGFRL 223