Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator ColR from Pseudomonas fluorescens FW300-N2E2

Subject, 222 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 1e-55
 Identities = 92/220 (41%), Positives = 144/220 (65%)

Query: 1   MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGY 60
           M++L+V+DN D++  + DYL L+G   DCA  G S ++L    HYD+I++DIM+P +DG 
Sbjct: 1   MKVLIVDDNHDVIETIMDYLTLEGIIADCAYHGESAINLIQQNHYDVIIMDIMMPKLDGI 60

Query: 61  TLCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYLIKPFALSELAARIEAVMRRA 120
              K+LRE+   +TP++ LTARD L D++  F SG DD+L KPFA+ EL  R+ ++  R 
Sbjct: 61  RTVKKLREELFCNTPILFLTARDSLQDKIDSFTSGGDDFLNKPFAMEELCLRLRSLHNRG 120

Query: 121 QGGGRRALQVGDLSYDLDTLEVTREGKLLKLNPVGLKLLAVLMQKSPHVLRREILEEALW 180
                  L+ G++S ++ T +  R GK +KL+ +   +L +L++ +P ++ +E + +A+W
Sbjct: 121 PRLDVGILRFGEISLNVATQQACRAGKEIKLSKIQRTILTLLLKHAPAIVSKEQVIDAVW 180

Query: 181 GDDCPDSDSLRSHVHQLRQVIDKPFDKPLLHTVHGVGYRL 220
           GDD P SD+LRSH++ LR  +DK F    L T+HG GYRL
Sbjct: 181 GDDAPCSDALRSHIYGLRSALDKGFTDSKLETIHGQGYRL 220