Pairwise Alignments

Query, 190 a.a., Electron transport complex protein RnfA from Pseudomonas fluorescens FW300-N2E2

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella loihica PV-4

 Score = 68.9 bits (167), Expect = 5e-17
 Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 15/201 (7%)

Query: 1   MTEIVLTLFSAALINNLVLHWPLGVDPLLAANGRKQVHALGLATACLMLIVGTL--GYLI 58
           M   +  L  +  I N+ L + LG+   LA + +K   A+GL  A ++++  ++    +I
Sbjct: 1   MEHYISLLIRSVFIENMALSFFLGMCTFLAVS-KKVTTAMGLGVAVIVVLAISVPVNQII 59

Query: 59  DHYLLAP----------SNLVSLRLLAWLSLSVLLIGPLLRLLARWRPAM-SFEGLW-PL 106
              +LAP          ++L  L+ + ++ +   L+  L   L ++ P + +  G++ PL
Sbjct: 60  YQGILAPGALAWAGVPDADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPL 119

Query: 107 LLGNAGILGVTLLNGQDDRGLGHAIALSLGAGLGFWLVLGLFDDLRQRTFNNDIPLPFRG 166
           +  N  I G      + D  LG ++   +G+G+G+ L + L   +R++    D+P   RG
Sbjct: 120 ITVNCAIFGAVSFMVERDYNLGESLVFGIGSGIGWALAIVLLAGIREKLKYADVPNGLRG 179

Query: 167 LPIQLISAGLMAVAFLGLRGL 187
           L I  ++AGLMA+ F+   G+
Sbjct: 180 LGITFVTAGLMALGFMSFSGV 200