Pairwise Alignments

Query, 190 a.a., Electron transport complex protein RnfA from Pseudomonas fluorescens FW300-N2E2

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella loihica PV-4

 Score = 68.6 bits (166), Expect = 7e-17
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 14/199 (7%)

Query: 3   EIVLTLF-SAALINNLVLHWPLGVDPLLAANGRKQVH-ALGLATACLMLIVGTLGYLIDH 60
           E  + LF  A  I+N+ L + +G+   LA + +      LG+A   +M +   L  LI  
Sbjct: 2   EHYINLFVQAVFIDNMALSFFMGMCTFLAVSKKVSTSFGLGIAVIVVMTLAVPLNQLIYS 61

Query: 61  YLLAPS----------NLVSLRLLAWLSLSVLLIGPLLRLLARWRPAM--SFEGLWPLLL 108
            +LAP           +L  L+L+ ++ +   L+  L   L ++ P++  S     PLL 
Sbjct: 62  KVLAPGALAWAGYPELDLSYLKLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLLT 121

Query: 109 GNAGILGVTLLNGQDDRGLGHAIALSLGAGLGFWLVLGLFDDLRQRTFNNDIPLPFRGLP 168
            N  I    +     D  LG ++  + G+GLG+ + + L   LR+R   + IP   +G+ 
Sbjct: 122 VNCAIFAGVIFMANRDYTLGESVVFATGSGLGWAMAIVLLAGLRERMKFHAIPAGLQGVG 181

Query: 169 IQLISAGLMAVAFLGLRGL 187
           I  I+ GLMA+ F+   G+
Sbjct: 182 ITFITTGLMALGFMSFSGI 200