Pairwise Alignments

Query, 190 a.a., Electron transport complex protein RnfA from Pseudomonas fluorescens FW300-N2E2

Subject, 192 a.a., RnfAE/NqrDE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (266), Expect = 2e-28
 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 5/193 (2%)

Query: 1   MTEIVLTLFSAALINNLVLHWPLGVDPLLAANGR-KQVHALGLATACLMLIVGTLGYLID 59
           M+E +L L S  L+NN VL   LG+ P +  + + +    + +AT  ++ +   L YL++
Sbjct: 1   MSEYLLLLISTVLVNNFVLVKFLGLCPFMGVSSKLESAIGMSMATTFVLTLASILSYLVN 60

Query: 60  HYLLAPSNLVSLRLLAWLSLSVLLIGPLLRLLARWRPAMSFEGLW---PLLLGNAGILGV 116
            YLL P +L  LR ++++ L + ++     ++ +   A     L    PL+  N  +LGV
Sbjct: 61  QYLLLPFDLGYLRTMSFI-LVIAVVVQFTEMVVQKTSAALHRALGIYLPLITTNCAVLGV 119

Query: 117 TLLNGQDDRGLGHAIALSLGAGLGFWLVLGLFDDLRQRTFNNDIPLPFRGLPIQLISAGL 176
            LLN  +      +     GA +GF LVL LF  +R+R    D+P PF+G  I +I+AGL
Sbjct: 120 ALLNVNEKHDFIQSAIYGFGAAVGFSLVLILFSAMRERLAAADVPEPFKGGAIAMITAGL 179

Query: 177 MAVAFLGLRGLVK 189
           M++AF+G  GLVK
Sbjct: 180 MSLAFMGFTGLVK 192