Pairwise Alignments

Query, 162 a.a., Electron transport complex protein RnfE from Pseudomonas fluorescens FW300-N2E2

Subject, 207 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 1e-13
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 26/167 (15%)

Query: 2   VGASDSLVGALGLWLAWALVLCSHGLAMGLVRQHLAACQRLLASIVLAATLSTCIGLVLQ 61
           +  S+S+  AL + LA   VL    L +  +R  +    R++A + + A+L   + +VLQ
Sbjct: 33  LAVSNSMQTALVMTLAVTFVLVFSNLIISSIRNFIPNSVRIIAQMTVIASLVIIVDMVLQ 92

Query: 62  AWALELYRPLSLYVGWVALSCVALEHEGFFVDSRWPGRLRLAGL------FGLLMISLGA 115
             A EL R LS++VG +  +C+ +     F   + P  L +         +G++++S+  
Sbjct: 93  DVAYELSRQLSVFVGLIITNCIIMGRAEAFA-MKMPPHLAVVDAMGNAMGYGVILLSVAF 151

Query: 116 VRELIGNGL-------------------PLALLAPGGFILLGLLLAA 143
           VREL+G G                     +  L P  F L+GLL+ A
Sbjct: 152 VRELLGAGTLFGHEILKTVENDGWYLANEMFKLPPSAFFLIGLLIWA 198