Pairwise Alignments

Query, 156 a.a., Cys-tRNA(Pro) deacylase YbaK from Pseudomonas fluorescens FW300-N2E2

Subject, 158 a.a., conserved hypothetical protein TIGR00011 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (375), Expect = 3e-41
 Identities = 82/155 (52%), Positives = 104/155 (67%), Gaps = 2/155 (1%)

Query: 1   MTPALDLLKKVRAEHRIHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGE--LL 58
           MTPA+ + KK +    +  Y HDP  A+YG EAA  LGL PAQVFKTLL A++K    L 
Sbjct: 1   MTPAVQMAKKAKIPFEVLEYSHDPHCAAYGEEAANVLGLAPAQVFKTLLVATDKAHAPLA 60

Query: 59  VAVVPVAGSLDLKGLAHAAGVKKVEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDSSA 118
           VA+VPV   L+LK +A   G KK++MAD   AQ+S+GYL+GGISPL QKK L T ID SA
Sbjct: 61  VALVPVDHQLNLKAVAKCLGQKKLQMADADLAQKSSGYLVGGISPLAQKKLLPTIIDESA 120

Query: 119 QPLASMFVSAGRRGLEVELAPSVLKEHTGATFADI 153
           +    ++VSAGRRGLE+ L  + L +    +FADI
Sbjct: 121 KQFDKIYVSAGRRGLEICLTANDLAKLCRGSFADI 155