Pairwise Alignments

Query, 353 a.a., Holliday junction DNA helicase RuvB from Pseudomonas fluorescens FW300-N2E2

Subject, 337 a.a., Holliday junction DNA helicase B (RefSeq) from Shewanella loihica PV-4

 Score =  461 bits (1185), Expect = e-134
 Identities = 233/336 (69%), Positives = 280/336 (83%), Gaps = 1/336 (0%)

Query: 1   VIEADRLI-AATGAPRDREEIQDRAIRPVSLADYIGQPTVREQMELFIQAARGRSESLDH 59
           +IEADRL+ A      +R+E  DRA+RP  L +Y GQ   R Q+++FI+AA+ R E+LDH
Sbjct: 1   MIEADRLVHAQPQGTEERDEQIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAQKRGEALDH 60

Query: 60  TLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHR 119
            LI+GPPGLGKTTLA I+A EMGV+IKSTSGPVLE+ GDLAALLTNLE  DVLFIDEIHR
Sbjct: 61  MLIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHR 120

Query: 120 LSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGI 179
           LSP+VEE+LYPAMED+QLDIMIGEGPAARSIKL+LPPFTL+GATTRAG LT+PLR RFGI
Sbjct: 121 LSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGALTSPLRARFGI 180

Query: 180 VQRLEFYNNADLATIVSRSAGILGLPLDPDGAYEIARRARGTPRIANRLLRRVRDFAEVR 239
             RLEFYN  DL++IV+RSA +L LP+D +GA E+ARR+RGTPRIANRLLRRVRD+AEV+
Sbjct: 181 PLRLEFYNVKDLSSIVTRSAKVLELPIDQEGAVEVARRSRGTPRIANRLLRRVRDYAEVK 240

Query: 240 AKGHITKPIADLALNLLDIDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTI 299
             G + K +A+ AL++LD+D  GFD+ DR+LLL +I+KF GGPVG+D+LAAAI EER TI
Sbjct: 241 HDGEVNKVVAESALDMLDVDVEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETI 300

Query: 300 EDVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIP 335
           EDVLEP+LIQQG+I RTPRGR+ T  AY HF L  P
Sbjct: 301 EDVLEPFLIQQGFIQRTPRGRIATARAYQHFNLIQP 336