Pairwise Alignments

Query, 417 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens FW300-N2E2

Subject, 424 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  224 bits (572), Expect = 3e-63
 Identities = 143/425 (33%), Positives = 206/425 (48%), Gaps = 33/425 (7%)

Query: 13  VSASTSQFAMASSQEESKGFIEDQSLTVLTRALYMNRDFKNNPSTSQSYREESGVAARAI 72
           ++AS +  A+ +S   S  FIED    V  R  YMNRDF+ +   +QS  EE        
Sbjct: 11  LAASIAAVALGASGVASAAFIEDSKAAVELRNFYMNRDFRQS-GAAQSKAEEWAQGFILK 69

Query: 73  YESGFTQGTVGVGVDGFAFGTVRIDGGSGRAGNGLFARDSDG--NLEDTQSKVGGAVKFR 130
            ESG+T+G VG G+D      V++D    R G G+  RD +     +D     G   K +
Sbjct: 70  MESGYTEGPVGFGLDAVGLLGVKLDSSPDRTGTGILQRDRNAPNRAQDDYGSAGLTAKAK 129

Query: 131 LSDTVLKYGNQFTTSPVFSTDDSRLLPEVATGTLITSKEIKGLELSAGHFNAISSQTGMG 190
           LS T L  G      PV   +DSRLLP+   G  + SKE+ GL L  G  + ++ +    
Sbjct: 130 LSATTLHVGTLQPVVPVLMRNDSRLLPQTYRGAWLQSKEVSGLTLDLGMLDRVNQRDSSD 189

Query: 191 DD--------------GLGLKSAD---IVGATYQFTDNFVAGVAASDVEDHYKKKYINLN 233
           ++              G G  ++D     G  Y ++           ++  Y +   NL 
Sbjct: 190 NEEMTVFNAGRRNITFGSGGSTSDEFLFAGGRYDWSPQLATSYYYGGLDGIYDQHNFNLV 249

Query: 234 YTLPINEDQSLNFDFNGYDSQDQGQKLSGDVDNRIWSLAAAYAIGAHKFTLAHQRSSGDT 293
           + LP+ + QS   D     S D G     +VDN  +     Y +G H FT  +Q   GDT
Sbjct: 250 HVLPLGDKQSFKTDLRFVRSTDDG---GSNVDNDAFGALFTYKLGGHGFTGGYQHMRGDT 306

Query: 294 GYVYGVDGGGTIFLANSIQYSDFNGQDERSWQARYDLNMKTYGVPGLSFMTRYVTGDNIE 353
           G+ Y    GG   L N +Q +DF  +DERSWQ RYD +    GVPGL+ MTRYV+GDN++
Sbjct: 307 GFAYVA--GGDNALINLLQINDFGNEDERSWQVRYDYDFAAMGVPGLTLMTRYVSGDNVD 364

Query: 354 --TGGAEGKEHEWDFETKYVMQSGPAKDLSFRVRAAFYRANSDYNAINGNDNNDTRLIIE 411
              G +EGK  E + +  YV+QSGP K+L  ++R A  R+N        ND ++ R+I+ 
Sbjct: 365 RGAGASEGKTWERNTDIAYVIQSGPLKNLGLKLRNATTRSNFQ------NDLDENRVIVS 418

Query: 412 YPLSI 416
           Y L +
Sbjct: 419 YSLPL 423