Pairwise Alignments

Query, 441 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

Subject, 459 a.a., C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  419 bits (1076), Expect = e-121
 Identities = 226/449 (50%), Positives = 306/449 (68%), Gaps = 15/449 (3%)

Query: 4   SVMVVDDEGSIRSAVEQWLSLSGFQVQLFARAD-ECLARLPEH-FPGVILSDVRMPGLSG 61
           SV+++DDE  I + + Q   L G  ++ FA  D + +A+L +  + GV++SDV MP L G
Sbjct: 11  SVLIIDDEPHIGTVLVQLFELEG--IKAFAATDPKGIAKLLDRDWAGVVISDVNMPQLDG 68

Query: 62  LELLAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDKR 121
           + L+ ++R +D DLPV+LLTG GD+ MAV A++ GAYDFLEKPF+ E +L  ++RALDKR
Sbjct: 69  ISLMQQIREQDADLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLDVVKRALDKR 128

Query: 122 TLVLENRRLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKELV 181
           +L LENR+L ++ ++       +LG S  +Q +R  +  +   P +VLI GETG+GKELV
Sbjct: 129 SLTLENRKLKKELESHNVPGPRILGHSVGIQRMRHIIDQVIDTPADVLIEGETGTGKELV 188

Query: 182 ARCLHDFGTRASMPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTLF 241
           AR LHD   R    FVA+NC AIPE L E+ELFG E+GAFTG    RIGK EYANGGTLF
Sbjct: 189 ARYLHDHSNRNQANFVAINCGAIPENLIESELFGAEAGAFTGVDKLRIGKFEYANGGTLF 248

Query: 242 LDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLDEARAGRFREDL 301
           LDEIES PL+ QVKLLRVL+++K+ERLGSN+SI +D+R+IAATK DL      G+FR+DL
Sbjct: 249 LDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIHLDIRVIAATKVDLKSLCDTGQFRQDL 308

Query: 302 AYRLNIAELRLPPLRERREDIPLLFEHFTHSAAERLGRAAAPLSGPQLSHLLSHDWPGNV 361
            YRLN+  + +PPLR+RREDIPLLF HF   A+ R  +A   L+  Q + L SHDWPGNV
Sbjct: 309 LYRLNLVTVPIPPLRDRREDIPLLFLHFARMASARYHKALIALNAEQNAILTSHDWPGNV 368

Query: 362 RELANVAERQVL---------GLDQPQALETEPGQSLAAQQEAFEAQCLRAALTRHKGDV 412
           REL N+AER VL          L    +L T    SL  + E FE   +  AL+ +KG +
Sbjct: 369 RELRNLAERYVLLGGEAAFAGTLGNAPSLHT--SMSLLQRVEFFERVLIEEALSHNKGSI 426

Query: 413 KAVLEELQLPRRTFNEKMQRHGLSREMFL 441
           K  +E+L+LPR+T  +KM+++ L R+ ++
Sbjct: 427 KLTMEQLELPRKTLYDKMRKYDLDRKQYI 455