Pairwise Alignments

Query, 600 a.a., sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 585 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 84.7 bits (208), Expect = 1e-20
 Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 55/340 (16%)

Query: 265 LLVFATLLVLILIWLAIRLVRSFAEIKRVNNALQSANDELEQRVEERTR---QLKDTQSE 321
           ++ FA L+ L    L+ R V + A  +R +  L+  N+ L+Q + ER R    L+  +  
Sbjct: 293 IMTFAILIALGFYLLSRRAVSTSAIFQRESAELRLLNERLQQEIAERERVEKTLEQAEQT 352

Query: 322 LMDTARQAGMAEIATNVLHNVGNVLNSVNISADLVSRKLRSSKAQGLGKAMQLINEHADD 381
           L  + + A + E++  V H +              ++ L + K    G  + L  +  D+
Sbjct: 353 LAQSQKLAALGEMSAAVSHEL--------------NQPLAAMKTYLAGARLLLQRKRPDE 398

Query: 382 LGHFLTEDAKGKLLPGYLNQLVEAIALEQQGLTDELAQLSKSVDHIKDIVSTQQSYAGAN 441
               L+  A+       ++ L++ +      +T +L   ++  +    IV  +++ + A 
Sbjct: 399 S---LSSFAR-------IDDLIDRMGK----ITRQLKSFARKGEDAFQIVDLREALSAAL 444

Query: 442 SLLEPLVVSELLEDALRMNSGALTRHHVTVIKEYGDVPRIMGDKHRLLLILINLISNAKY 501
           +++EP +  E ++    M    +                +MGD+ RL  +++NL+ NA  
Sbjct: 445 AIMEPQIKQEFVKIERNMPKQPVL---------------VMGDRIRLEQVIVNLLRNAMD 489

Query: 502 AMAGVSNHARNMTLKAAVVDGQTLQISVKDEGEGIPEENMTRIFAHGFTTRKEGHGFGLH 561
           A AG  N    + L      G+T ++SV+D G GI +    +IF   +TT++ G G GL 
Sbjct: 490 ATAGTPNPVVEIDLTT----GETARLSVRDNGPGITD--FEQIFEPFYTTKRPGDGVGLG 543

Query: 562 SCALAAIEME--GRLTAHSEGPGRGATFQLQLPLKLAEGE 599
               + I  +  GRL A +    RGA F+++LPL  A+ +
Sbjct: 544 LAISSGIVSDHGGRLMARNR-TSRGAVFEMRLPLWTADSQ 582