Pairwise Alignments

Query, 496 a.a., Cytosol aminopeptidase PepA (EC 3.4.11.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 511 a.a., cytosol aminopeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  271 bits (693), Expect = 4e-77
 Identities = 177/445 (39%), Positives = 250/445 (56%), Gaps = 21/445 (4%)

Query: 53  AGKVGQSLLLHNLPNLKAERVLLVGVGKDAELGDRPFRKIIAGVLGTLKGLGGADAALAL 112
           +GK G+ L +     + A+RVLLVG+G    L       +   +   L+ +  A   +  
Sbjct: 74  SGKRGEVLEILVPSEIDAKRVLLVGIGDAKTLTPGEINALGGNIAAKLETVPQATVRVLT 133

Query: 113 DELVIKGRDSYGKNRLLAETLVDGEYRFDQFK-SQKAEPRTLKKITVLTIKAAQAEVQRA 171
             L       +G    LA  +    YR+ QFK S + E      +  L++       Q+ 
Sbjct: 134 QGL--NNAPLFGSE--LAHGIELRSYRYTQFKASNRVEKNYQIGVDDLSLN------QKH 183

Query: 172 VTHATAIANGMAFTRDLGNLPPNICHPTFLGEQAKALGKEFKGLKVEVFDEKKIKDLGMG 231
             +  A+  G+   RDL N P    +P     +A+ L  +  G+KV V + K I+ L +G
Sbjct: 184 HKNLQAVEAGVFLARDLTNAPAGNMYPESFANEARKL--KSLGVKVTVLEAKDIERLNLG 241

Query: 232 SFYAVGQGSAQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKP-GAGMDEMKYDM 290
           +  AVG+GS +PP+L+V  + G K  E P ALVGKGITFD+GG ++K  G  +  MK DM
Sbjct: 242 ALAAVGKGSERPPKLVVAHWPGSK--EAPIALVGKGITFDSGGYNIKATGTSIARMKSDM 299

Query: 291 GGAASVFGTLRAVLELQLPINLVCILACAENMPSGTASRPGDIVTTMSGQTVEILNTDAE 350
            GAA+V GT++A+   + P+NLV I+  AENM SG A  PGD++TT  G TVE+LNTDAE
Sbjct: 300 AGAATVLGTVKAMAIQKAPVNLVAIMPMAENMVSGHAMIPGDVITTAQGLTVEVLNTDAE 359

Query: 351 GRLVLCDALTYS-ERFKPQAVIDIATLTGACIVALGSHTSGLLGNNDELIGQLLSAGQQA 409
           GRLVL D L Y+ E ++P  +ID+ATLTG+ + ALG+  +GL  +++ L+ QL  AGQQ 
Sbjct: 360 GRLVLADGLWYARENYRPSVIIDVATLTGSKVSALGTVYAGLFTDSEPLVQQLTFAGQQV 419

Query: 410 DDRAWQLPLFDEYQEQLDSPFADIANIGGP-KAGTITAACFLSRFTKNLNWAHLDIAG-- 466
            ++ W+LPL   Y ++L S  AD+ N G    AG   AA FL RF  +  WAHLDIAG  
Sbjct: 420 GEKVWRLPLDQAYDDELKSTIADLKNTGKEGSAGASAAAMFLKRFAGDQPWAHLDIAGHA 479

Query: 467 -TAWTSGGKDKGATGRPVPLLTQYL 490
            TA  +     GATG  V LL+ +L
Sbjct: 480 LTATDTAVVPAGATGYGVRLLSTWL 504