Pairwise Alignments

Query, 375 a.a., ABC transporter for D-Alanine, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 350 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score =  245 bits (626), Expect = 1e-69
 Identities = 143/349 (40%), Positives = 210/349 (60%), Gaps = 8/349 (2%)

Query: 24  NTQTNLQHRGITSGFGFLERSAGFGIAQHLIDYTEADSYARVFLIGLLNTLLVTFIGVIL 83
           N    +   G+T GFGFLER+A F I +  I +   DSYAR   +G+LNT  V  +  IL
Sbjct: 4   NIAATMARIGLTPGFGFLERAAKFEIGESTIPFRAGDSYARAIAVGVLNTAKVAVVSCIL 63

Query: 84  ATILGFIIGVARLSQNWIISKLATVYVEVFRNIPPLLQILFWYFAVFLSMPGPRAAHNFG 143
           AT+LG  + + RL+ + ++S L    +EV RN P LLQ+ FW  A+  ++P PR A  + 
Sbjct: 64  ATVLGVALALMRLAGHPVLSGLVRWSIEVVRNTPLLLQLFFW-IALAHALPPPRRAVVWF 122

Query: 144 DTFFVSSRGLNMPAALVAEGFWPFVISVVLAIVAIVLMTRWANKRFEATGEPFHKFWVGL 203
           D  F+++RG+ +P+ ++AEG W   I+ + AI+   L   W ++    T  P     +GL
Sbjct: 123 DCVFLTNRGVYLPSVIIAEGSW-MAITAIAAILLGWLALLWRSR----TRGPLSPLPLGL 177

Query: 204 ALFLVIPALSALLFGAPVHWEMPELKGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVR 263
              L + A+     G  +    P ++GFN  GG  L PE  AL + LTV  AA  AEIVR
Sbjct: 178 VAILAL-AVVIYASGFRISLHSPVVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIVR 236

Query: 264 SGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGY 323
           +GI SV   Q +AAR+LGL     +R V++PQALRVI P  TS YL++ K+SSLA  IGY
Sbjct: 237 AGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIGY 296

Query: 324 PEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYNKRIAL 372
           P+++++   T  N TGQA+E + I +++YL +++S+S +MN YN R+A+
Sbjct: 297 PDLMNI-TNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAM 344