Pairwise Alignments

Query, 603 a.a., LppC putative lipoprotein from Pseudomonas fluorescens FW300-N2E2

Subject, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (555), Expect = 6e-61
 Identities = 160/595 (26%), Positives = 287/595 (48%), Gaps = 19/595 (3%)

Query: 6   RLLSALCLAALLAACASSPSS-SLGELPRTPDASIEQLLEQATQSKNPEKAALLRLSAAD 64
           RLL+ + L+ +L+AC++ PSS  + ++   P  + +  L +A  S+  ++   L + A  
Sbjct: 11  RLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWL-IMALK 69

Query: 65  LAYRQGNAGQSAQILQQVPMEQLKPGQQIFASTLSAELAMTRNQPKAALTALGHPSLQHL 124
            A  + N  Q+  ++ ++  + L P QQ     L A+L     Q + AL  L   S Q  
Sbjct: 70  AAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQL---SFQAN 126

Query: 125 SEMPVEQQVRTGTVRARALEADGQTLAAAKERIFIAPLLENDAAAKNHESIWSLIASLPT 184
             +P  Q  +   +RA    A  ++  + +E + +  L  N       + IW+ +     
Sbjct: 127 WSLPQVQWQQYHQLRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQIWANLNHYSA 186

Query: 185 DQLQPSSND----DLGGWLSLAQAVKTAGT-LEQQQAAIDHWREQNPKHPAALQLPIPLV 239
            ++   S +     L GWL LA  +KT G+ L Q +  ++ W  +NP+HPAA+  P  + 
Sbjct: 187 SKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTPKAIT 246

Query: 240 KLKELASQPLSKIALLLPQNGPLAAVAKALREGFMAAHYQ-AQQAGQKPPSIQFYDSSSL 298
            +  L     +  ALLLP  G  A  A+ +R+GF+ A    A +      +I   ++ +L
Sbjct: 247 DILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATLTIIDTNAETL 306

Query: 299 TSMDEFYRKAQADGVQLVVGPLEKPLVKQIS----TRPQLPITTLALNYSEGEQGPPQLF 354
            S+D      Q D    VVGPL K  ++++     +R Q+ I TLALN  +         
Sbjct: 307 ESVDAILTSKQID---FVVGPLIKGNIEKLQQFQQSRGQM-IPTLALNIPDQIDTTAGAC 362

Query: 355 QFGLAPEDEAREVSRRARADGLHRAAAMVPKGEWGDRVLKAFSQDWQANGGTIIAIERVD 414
              L+PE E  + ++     G      + P+  +G+RV++AF+++W+      +A+    
Sbjct: 363 YLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSKNKVAVNLFG 422

Query: 415 QPVQLAQQIADMFQLRQSEGRAKSLQSTVGTTVAAQPSRRQDIEFIFLASTPQQAQQIKP 474
              QL + I  +F L+ S+     ++S +G  + +QP  R+DI+ +++ +   +   IKP
Sbjct: 423 DKRQLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIVANSSELTLIKP 482

Query: 475 TLNFQYAGDVPVYATSSVFSASGDQNQYNDMSGIRFCETPWLLDANDPLRKQVTAQWPQA 534
            +      D       S  +++    QY D+SG+ + + P L+     +++Q+T  WP++
Sbjct: 483 FIEVAINPDTRPPKLFSNSNSNTGGRQYEDLSGVTYSDIPLLIQPAPSIKEQLTQIWPES 542

Query: 535 GGSLGRLYAMGVDAYRLAPRLGQLKTLPDSRIEGLSGSLAVSATQRVQRQLPWAE 589
             +  RL A+G+DAYRL   L Q+K +    I+G +G L++     VQR++ WAE
Sbjct: 543 SNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCVVQREISWAE 597