Pairwise Alignments

Query, 603 a.a., LppC putative lipoprotein from Pseudomonas fluorescens FW300-N2E2

Subject, 634 a.a., LppC family lipoprotein (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (519), Expect = 9e-57
 Identities = 168/638 (26%), Positives = 282/638 (44%), Gaps = 57/638 (8%)

Query: 6   RLLSALCLAALLAACASSPS-----SSLGELPRTPDASIEQLLEQATQSKNPEKAALLRL 60
           + +SA  LA +L  CA++P+     S+   L     +  E L + A Q+ + E+   L L
Sbjct: 9   KFISAAVLATVLFGCATAPTPVKETSTQVSLVNATQSPAEYLAD-AKQASDAEQKNRLML 67

Query: 61  SAADLAYRQGNAGQSAQILQQV-PMEQLKPGQQIFASTLSAELAMTRNQPKAALTALGHP 119
            AA     QG+ G +++ L  V P    KP        LSA +         AL  L +P
Sbjct: 68  LAAHAFINQGDTGNASKTLAAVKPSLVNKPEILAEHRYLSARVLEQTANYDQALAQLNYP 127

Query: 120 SLQHLSEMPVEQQVRTGTVRARALEADGQTLAAAKERIFIAPLLENDAAAKNHESIWSLI 179
           S   L+     Q V    ++AR  +     +  AKE   +A  L +  A++ ++ IW ++
Sbjct: 128 SKWRLANW---QMVSYHQLKARLFQLSKSPIEQAKELTLLATYLPSTEASEVNDEIWGIL 184

Query: 180 ASLPTDQL----QPSSNDDLGGWLSLAQAVKTAGTLEQQQAA-IDHWREQNPKHPAALQL 234
             L    L    Q SSN    GWL LA   K      QQ    + +W++ NP HP A +L
Sbjct: 185 QPLHEQTLLAFSQDSSNPIFAGWLQLAYIAKHYAIDPQQLVQQLGNWQQDNPGHPGAKKL 244

Query: 235 PIPLVKLKELASQPLSKIALLLPQNGPLAAVAKALREGFMAAHYQAQQAGQKPPSIQFYD 294
           P  L +          KIA+LLP  GP AA+A  +++G ++++           S+ F+D
Sbjct: 245 PTDLERALNTKPYKPKKIAVLLPLTGPRAAIADTVKQGIISSYLTNPDDSV---SVNFFD 301

Query: 295 SSSLTSMDEFYRKAQADGVQLVVGPLEKPLVK---------------------------- 326
           ++    + +  ++A A G   ++GPL +  V+                            
Sbjct: 302 TAQGAELAQ--QQAIAAGADFIIGPLLQSEVESLMQAEQKASQQANGQQQPGAQAQAQAQ 359

Query: 327 ---QISTRPQLPITTLALNYSEGEQGPPQLFQFGLAPEDEAREVSRRARADGLHRAAAMV 383
              Q   +P++P   L LN+ +        F F L+P DEA + +++   DG+ +   + 
Sbjct: 360 AQAQAQVQPKVP--QLFLNHVDSFTPSNDQFFFALSPTDEAVDAAQKLYNDGIEKPLLLA 417

Query: 384 PKGEWGDRVLKAFSQDWQANGGTIIAIERVDQPVQLAQQIADMFQLRQSEGRAKSLQSTV 443
                G R+ +AF+  WQ        I    +  ++   +     +  S+ R   +++ +
Sbjct: 418 SDDAVGRRMAEAFNGKWQELTHEAAEIHYYKRGDEMKVTVQKSLGVIDSKERIARIKTLL 477

Query: 444 GTTVAAQPSRRQDIEFIFLASTPQQAQQIKPTL--NFQ-YAGDVPVYATSSVFSASGDQN 500
           G  + A    R+DI+ I++ ++ Q    +KP +  NF  +A  VP+Y TS     S  + 
Sbjct: 478 GNKIEADFRSRRDIDAIYMIASSQDLPLLKPFIDVNFSVFAEPVPLYTTSRSRIESQSRT 537

Query: 501 QYNDMSGIRFCETPWLLDANDPLRKQVTAQWPQAGGSLGRLYAMGVDAYRLAPRLGQLKT 560
              +++ +   + PWL++ N     +V   WP  G S  RLY MG DA +L  +L Q++ 
Sbjct: 538 AAQELNNLTISDIPWLIETNAETA-EVARLWPTWGNSQKRLYVMGFDALQLVSKLAQMRA 596

Query: 561 LPDSRIEGLSGSLAVSATQRVQRQLPWAEFLNGQVQRL 598
           LP  +  G SG L+VS    + RQL W  +  G ++ L
Sbjct: 597 LPGYQYSGRSGLLSVSPDGTINRQLSWGRYQRGNLRPL 634