Pairwise Alignments

Query, 603 a.a., LppC putative lipoprotein from Pseudomonas fluorescens FW300-N2E2

Subject, 619 a.a., lipoprotein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  192 bits (489), Expect = 3e-53
 Identities = 166/625 (26%), Positives = 271/625 (43%), Gaps = 46/625 (7%)

Query: 6   RLLSALCLAALLAACAS-SPSS---------SLGELPRTPDASIEQLLEQATQSKNPEKA 55
           + +S   L+A+LA C S +P+S         SL   P  P+      L QA  SK+P++ 
Sbjct: 9   KFVSVAILSAVLAGCGSQAPTSTNTAPTVATSLASAPLAPNV----YLAQAANSKDPQQR 64

Query: 56  ALLRLSAADLAYRQGNAGQSAQILQQVPMEQLKPGQQIFAST--LSAELAMTRNQPKAAL 113
               L AA  +Y   N   +AQ L +  +  L     + A    L+A +    + P  AL
Sbjct: 65  DTYLLLAAH-SYINANDYAAAQKLLKPMLPSLTQIPTLVAEHKYLTARVLEHTSTPLDAL 123

Query: 114 TALGHPSLQHLSEMPVEQQVRTGTVRARALEADGQTLAAAKERIFIAPLLENDAAAKNHE 173
             L +PS   L   P  Q      +RA   + + Q +   +E   +   L    A++ + 
Sbjct: 124 KTLTYPSTWVL---PGWQMAAYHQLRAHLFQLNKQPIDQVRELSLLTTYLPPAEASEVNN 180

Query: 174 SIWSLIASLPTDQLQPSSNDD----LGGWLSLAQAVKTAGTLEQQQAA-IDHWREQNPKH 228
            IW ++  +    L   + D       GWL LA   K       Q    +  W++QNP H
Sbjct: 181 QIWQVLQPMHEQTLLEFTKDAKSPVFAGWLQLAYIAKHYAVDPNQLVRYLGDWQKQNPYH 240

Query: 229 PAALQLPIPLVKLKELASQPLSKIALLLPQNGPLAAVAKALREGFMAAHYQAQQAGQKPP 288
           PAA +LP  L             IA+LLP  G  A+ A A+R+G +A+ Y A+   Q   
Sbjct: 241 PAAAKLPADLDHALNAKPYTPKNIAVLLPLTGQRASAANAIRQGILAS-YLAKPNEQV-- 297

Query: 289 SIQFYDSSSLTSMDEFYRKAQADGVQLVVGPLEKPLVKQI----------STRP--QLPI 336
           S+ FYD+++       Y++A   G + ++GPL    + Q+          +T P    PI
Sbjct: 298 SVNFYDTAN--DAVSAYQQAVNAGAEFIIGPLLPNEIDQLLALNTSATPTATAPAASAPI 355

Query: 337 TTLALNYSEGEQGPPQLFQFGLAPEDEAREVSRRARADGLHRAAAMVPKGEWGDRVLKAF 396
             L LN ++        F F L+P  EA + + R   DG+     +      G R+ ++F
Sbjct: 356 PQLFLNQTDKFAPDANKFYFALSPAQEAADAATRMYQDGVTMPLLLASNDAIGKRMAESF 415

Query: 397 SQDWQANGGTIIAIERVDQPVQLAQQIADMFQLRQSEGRAKSLQSTVGTTVAAQPSRRQD 456
            Q W+      I +   D   ++   + D   +R S+ R   ++  +G +V A    RQD
Sbjct: 416 IQAWKKKSDAPIEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNSVQADFRSRQD 475

Query: 457 IEFIFLASTPQQAQQIKPTLNFQYA---GDVPVYATSSVFSASGDQNQYNDMSGIRFCET 513
           I+ I++ STPQ+   +K  ++  ++     VP+Y +S     +       D++ +   + 
Sbjct: 476 IDAIYMISTPQELTLLKAFIDVTFSVFTQPVPLYTSSRSRIDNESSQTAQDLNNLTLSDA 535

Query: 514 PWLLDANDPLRKQVTAQWPQAGGSLGRLYAMGVDAYRLAPRLGQLKTLPDSRIEGLSGSL 573
           PWL+  N      V   WP       RL+ MG DA  L  +L Q+++    +  G SG L
Sbjct: 536 PWLMQ-NSEENLMVNTLWPGWNNGQKRLFVMGYDAMDLISKLAQMRSFTGYQFNGRSGVL 594

Query: 574 AVSATQRVQRQLPWAEFLNGQVQRL 598
           +V+    + RQL W  +  G  ++L
Sbjct: 595 SVNPDGVINRQLSWGRYQRGSFRQL 619