Pairwise Alignments

Query, 120 a.a., Predicted endonuclease distantly related to archaeal Holliday junction resolvase from Pseudomonas fluorescens FW300-N2E2

Subject, 108 a.a., conserved hypothetical protein TIGR00252 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.8 bits (203), Expect = 1e-21
 Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 4/109 (3%)

Query: 10  GRDAEGQALAHLQQHGLRLVAQNWLCKRGELDLVMLDGDTVVFVEVRYRKNTQWGGALDS 69
           G+ AE  A ++L+Q GL  V +N     GE+DLVM      VFVEV+YR   Q+GGA+ +
Sbjct: 4   GQQAESLAQSYLEQQGLSFVERNVRYPFGEIDLVMRHKKYWVFVEVKYRSANQFGGAIQA 63

Query: 70  IDERKRQKLVLAAQYFLQSEPRWADHPCRFDVVAIDSNAAQLNWLQNAF 118
           + + +  ++ +AA ++LQS     D PCRFDVVAI+    Q+ WL +AF
Sbjct: 64  LSKAQIGRIRMAASHYLQSHK--LDVPCRFDVVAIED--TQIQWLVDAF 108