Pairwise Alignments

Query, 120 a.a., Predicted endonuclease distantly related to archaeal Holliday junction resolvase from Pseudomonas fluorescens FW300-N2E2

Subject, 134 a.a., conserved hypothetical protein TIGR00252 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 75.5 bits (184), Expect = 2e-19
 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 5   SRQQSGRDAEGQALAHLQQHGLRLVAQNWLCKRGELDLVMLDGDTVVFVEVRYRKNTQWG 64
           +R  +G+  E +A A LQ+ G R++A+NW     ELD++   GDT+VFVEV+ R      
Sbjct: 4   ARHATGQHGEDEAAALLQRTGHRIIARNWRHGGLELDIICETGDTIVFVEVKTRAAHGLT 63

Query: 65  GALDSIDERKRQKLVLAAQYFLQSEPRWADHPCRFDVVAIDSNAA--QLNWLQNAFD 119
              D++  +KR +L+ AA+ +L +   W D  CRFD+V +    A   L  + +AFD
Sbjct: 64  SPTDALTHQKRHRLIRAARAWLAAADAW-DRACRFDLVCVTQRGATCTLEHITDAFD 119



 Score = 21.9 bits (45), Expect = 0.003
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 4  RSRQQSGRDAEGQALAHLQQHGLRLVAQNWL 34
          ++R   G  +   AL H ++H L   A+ WL
Sbjct: 55 KTRAAHGLTSPTDALTHQKRHRLIRAARAWL 85